Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0394 ATGGGTTGTATATGCTCGAAAGAGAATTCTTCAAATGATTACGTTGCTGAGACCCATGCCAGAGACAAGGATACGAAGTCAAATAGAATCTCAAAACATTTGAGTTCGGGAGAGAAGGTCGCAATAGAGGCTGATGGTAGTGGCAATGATGCAACTACACGGTTGATTTCTAATCCGTCTCGGGATGGAGCTTCAGGTTCCAGTTCCGGTTCATCAGATGAGGGGGAGAAGAACGGAGAAACAGAAACTACTGTAAAGCCTGCAAAACATCTGGTTCATATCCCCTCAAACATGGGAATTGGAAATGGATTACAAGCACAACCTAAGATGGCTAGGATAATTACTGAACCTAAGGTGGAAAGAGGAGCTCAAGTTCTTTCTGGCTGGCCTTCTTGGCTTACTGCAGTTGCAGGGGAAGCCATTAATGGTTGGATACCTCGCAGAGCAGACTCATATGAGAAGTTGGAGAAGATTGGGCAAGGAACTTACAGCAGTGTTTACAGAGCTCGCGATCTAGAAACAAACAAAATTGTTGCATTGAAGAAGGTTCGATTTGCTAATATGGATCCAGAAAGTGTTCGTTTTATGGCGAGGGAAATTACTGTACTGCGAAGACTTGATCATCCAAATGTCATGAAACTTGAAGGCATCATTACTTCACGGGTCTCGGGTAGCTTGTACCTTGTTTTTGAATATATGGAACATGATCTTGCAGGGCTTTCAGCAACACCTGGCATCAAGTTCACTGAAGGGCAGATCAAATGTTATATGCAACAGTTGCTTTGTGGTATTGAGCACTGCCACAGTCATGGTGTTCTGCATCGAGACATCAAGGGCTCAAATCTTCTGATTGACAATGATGGCAATCTAAAGATTGGTGATTTTGGGCTAGCAACTTTCTTTGAGCCTTCTAAGGGTCAGATTTTGACAAGCCGTGTGGTAACCTTGTGGTACCGACCACCTGAACTCCTACTGGGAGCCACAAATTATGGGGTTGCAGTAGACTTGTGGAGTGCTGGTTGCATTCTTGCAGAGTTGTTTGCCGGAAAGCCTATAATGCCTGGACGAACAGAGGTGGAGCAACTTCACAAAATCTTCAAACTCTGTGGATCACCGTCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCAACAATTTTCAAACCTCAACATCCCTACAAACGTGTTGTTGCTGAGACATATAAGGATTTTCCTCCATCAGCATTAAGCCTTATGGAAGTCCTCCTTGCTATTGAACCTGAGGATCGGGGAACTGCTTCTTTAGCACTTCAGAGTGAGTTCTTTACCACGAAGCCCCTTCCTTGTGATCCTTCAACTTTGCCAAAATATCCACCCAGTAAGGAGTTTGATGTCAAGTTCCGACAAGAAGAAGCCAGAAGACGAAGAGCTGGGAATAACAAAGGAAATGTAGAGGAATCAGCTAACAAGGTTTCCAAAGAATCTAAAGCTGTTCCAGCACCTGATGCTAATGCTGAATTACGGTCATCAATCGAGAAGAGACAAGGGCTGGCTAACCCTAAATGTATCAGCGAGAAGTTCAATCCTGATGAGGATGGTGGTTCTGGCTTCCCTATTGAACCTTCAAAGACAAGAGCACTCAATGCCTTGTCTCATTCTGGTCAGTCAATGCATCCAAGCGTATATGGATCTTCACGCAATATGAATTCGAACAAGGAAGAGTTTATTGCTGGCCCTGGCCATGTCTATAATTCAGGAAATCCTGCAGTATTGAGAAAACAGAGATCCTGTATGAACAGGAATGCTGCTCAATTGTCAAGATTTTCTAATTCAGTTGCCAATGGAGGTGGTTTAAAGCTCGATATGAGTGGAGATGCTAGTGTGAGTTCACAGTGGCCTGATGATTGCTTCGGCACACAATATGACCATCTTGTCGATGATGAATCCAACCAATTGCTTAAGTCTTTGCACAAGAAGGACATACATCCTGGTACAAAGGAGCCTCCCAAGGCCTTTGCCCCAAAAAATGGTCAAATGTACTATTCAGGGCCACTAGTCCCTGGAGGTGAAAATCTTGATGAAATGCTTAAGGAACATGAAAGGCATATCCAACAAGCTGTCCGCAAGTCACGCTCAGATAAGGTCAAGATCAGTAAATGTGACAATGACAATGGCCAAACTGAATCCCTACTTCACCATGGTTCTCGGAACATCTGTGATTATGGCTTCTGTCTCAGTTCTAACCAACAAACTGTAGTTGTTCAAAGGCCTAAAGCAGCTAATCAAACCCTGAACTTGAAGCTCATCATTCTGGGGCTTTTGGTTGCTCTTTTGCTCATCTTTATGCTGAGGTCAGGCTTCTCTTCTTCAAACCAAGACCTGACTAATCCAAGTTCTTCACATACAGAAGTAGTAGCCATGGATTCTTCAAATGGTGAGAAAGAGAAGAGTCATGAGACAAGAGATTGTTCATCACTTGTTTGCAACAAGATACCAGCTTCTCTTGCTCAAGCTCTGATCCATTACACAACCTCAACAATAACACCACAACAAACTCTGAAAGAGATATCAGTGACAGCAAGAGTTCTGGAGAAGAGATCGCCATGCAATTTCTTAGTCTTTGGCTTAGGCCATGATAGCCTCATGTGGAGTTCTCTCAACCATGGTGGCAGAACTGTCTTCCTTGAAGAAGATGAGGCATGGATTGAGCAAATTAACCACAGGTTCCCCATATTAGAGTCCTACCATGTGACCTATGAGAGCAAGGTGAATGAAGCAGATAACCTAATGGAGATTGGAAGAGGAAGAGAGTGTAGAGAAAGAGTCAAGTCATCGGCGGAGATTCACTTCGCCGGTGGACAATCTGTGGCTTGCGTCAGCCTTTTATTGCGTCTTCTTCTCACTTCTTATCAGCGGCTTAGGGCACGCATTCTTTCTAATCCATCGCCCCCTTCTTTTGTGTCTTCTTCAGATGTGGTCTTAAGTAAAGAAGGTCCGATTAGAACTTTACAAGTGATAAAGGCTGCAACTTTTCTGAGTTTACTGAAGAAATGGGCTATTCGTGATAAGTTTTTGTCACCCTTGTTTCATCCCTTGTCTTTGAACTTTGTAATTTTCTGA 3102 0.4352 MGCICSKENSSNDYVAETHARDKDTKSNRISKHLSSGEKVAIEADGSGNDATTRLISNPSRDGASGSSSGSSDEGEKNGETETTVKPAKHLVHIPSNMGIGNGLQAQPKMARIITEPKVERGAQVLSGWPSWLTAVAGEAINGWIPRRADSYEKLEKIGQGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMAREITVLRRLDHPNVMKLEGIITSRVSGSLYLVFEYMEHDLAGLSATPGIKFTEGQIKCYMQQLLCGIEHCHSHGVLHRDIKGSNLLIDNDGNLKIGDFGLATFFEPSKGQILTSRVVTLWYRPPELLLGATNYGVAVDLWSAGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRVVAETYKDFPPSALSLMEVLLAIEPEDRGTASLALQSEFFTTKPLPCDPSTLPKYPPSKEFDVKFRQEEARRRRAGNNKGNVEESANKVSKESKAVPAPDANAELRSSIEKRQGLANPKCISEKFNPDEDGGSGFPIEPSKTRALNALSHSGQSMHPSVYGSSRNMNSNKEEFIAGPGHVYNSGNPAVLRKQRSCMNRNAAQLSRFSNSVANGGGLKLDMSGDASVSSQWPDDCFGTQYDHLVDDESNQLLKSLHKKDIHPGTKEPPKAFAPKNGQMYYSGPLVPGGENLDEMLKEHERHIQQAVRKSRSDKVKISKCDNDNGQTESLLHHGSRNICDYGFCLSSNQQTVVVQRPKAANQTLNLKLIILGLLVALLLIFMLRSGFSSSNQDLTNPSSSHTEVVAMDSSNGEKEKSHETRDCSSLVCNKIPASLAQALIHYTTSTITPQQTLKEISVTARVLEKRSPCNFLVFGLGHDSLMWSSLNHGGRTVFLEEDEAWIEQINHRFPILESYHVTYESKVNEADNLMEIGRGRECRERVKSSAEIHFAGGQSVACVSLLLRLLLTSYQRLRARILSNPSPPSFVSSSDVVLSKEGPIRTLQVIKAATFLSLLKKWAIRDKFLSPLFHPLSLNFVIF 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0394 1033 MobiDBLite consensus disorder prediction 783 812 - -
Lele13g0394 1033 CDD STKc_CDK9_like 152 436 - -
Lele13g0394 1033 FunFam probable serine/threonine-protein kinase At1g54610 139 234 - -
Lele13g0394 1033 MobiDBLite consensus disorder prediction 783 801 - -
Lele13g0394 1033 ProSiteProfiles Protein kinase domain profile. 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0394 1033 SUPERFAMILY Protein kinase-like (PK-like) 145 444 IPR011009 -
Lele13g0394 1033 MobiDBLite consensus disorder prediction 50 74 - -
Lele13g0394 1033 FunFam probable serine/threonine-protein kinase At1g54610 235 476 - -
Lele13g0394 1033 Gene3D Transferase(Phosphotransferase) domain 1 240 476 - -
Lele13g0394 1033 PANTHER CELL DIVISION PROTEIN KINASE 150 442 - -
Lele13g0394 1033 Pfam Polysaccharide biosynthesis 848 934 IPR021148 -
Lele13g0394 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lele13g0394 1033 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Lele13g0394 1033 MobiDBLite consensus disorder prediction 14 39 - -
Lele13g0394 1033 Pfam Protein kinase domain 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0394 1033 Coils Coil 683 703 - -
Lele13g0394 1033 Gene3D Phosphorylase Kinase; domain 1 147 239 - -
Lele13g0394 1033 MobiDBLite consensus disorder prediction 466 534 - -
Lele13g0394 1033 SMART serkin_6 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0394 1033 MobiDBLite consensus disorder prediction 466 486 - -
Lele13g0394 1033 MobiDBLite consensus disorder prediction 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0394 Lele-ChrLele13 16212118 16220952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0394 144 468 Core Cell Cycle Gene Families AT5G10270 52.187 4.46e-114 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele13g0394 Pkinase 1.3e-69 CL0016