Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0392 ATGATTCTTGATCCGACCCGCTGGGCGGTGCGGTTTTTCATTCGTACCTTATTTCGAAGACTACAAAACCCTAGGCGGCTTCACTTTCAGCTCTCACTCCTCAACTCTCCTAGGCGTAGCACTTCAGCTTTCGGAAGAACGCCCGCACTATCTTGCATTAGGGGCGGCCCGTTTTTCTGCGAAGCCATGGCGCTGATTCTTCATGCAACGAAAACTAATAAAAATTCTTACAAGATTCTCATTGCCGCTGAGTACAGTGGTGTGGATGTTAAATTAGCCCCAAATTTTGAGTTTGGTGTTTCTAATAATACTCCGGAATTTATCAAGATGAATCCTATTGGCAAGGTGCCTGTGTTGGAAACACCAGATGGTCCAGTTTTTGAAAGTAATGCCATTGCTCGCTATGTTGCTAGATTGAAGGGTGACAATGCATTGTATGGATCTTCTCTAATGGACTATGCTCACATTGAACAGTGGATTGATTTTTCATCATTAGAGATTGATGCCAATATTCTCACCTGGTTCAGACCAAGAATAGGAAGAGCCACTTACCTTCCTCCTGTTGAGGAAGCTGCAATTTTTTCACTAAAGAGAGCCTTGGGTGCATTGAACACCCACCTGACTTCAAATACATATTTGGTTGGGCATTCTGTGACCATAGCAGACATTATTTTGACATGCAATTTGTTTATCGGTTTCACTAAGCTCATGACCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCCAAATTCCATAAGATCTTAGGTGATGTTAAGCAGGCTGAAACGGTTATACCCATACAATCTGCACAGAAGCCCAAAGAAGCTAAGCCTAAGAAAGAAGCTCAACCAAAGAAAGAGACTAAGAAAGAGGCGCCTAAAGAGGCTGAAAAGCCCAAAGAGGCTGAAAAGCCCAAAGAGGCTGAAAAGCCCAAAGAGGCTGAAGAGGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCCCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACCAAGACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGACCCTGAGGGATACTCTCTCTGGTTGTGTGATTACAAATACAATGAGGAGAATACTGTTTCCTTTGTGACCCTGAACAAGGTTGGTGGATTTCTTCAGAGGATGGATCTTGCTCGCAAATATGCATTTGGGAAAATGCTTGTGATTGGATCTGAGCCACCATTTAAGGTGAAGGGGTTGTGGCTATTCCGTGGGCAAGAAATACCACAATTCGTCATTGATGAATGCTACGACATGGAACTCTACGAGTGGAGGAAGGTTGATATCTCAGATGAAGCTCAGAAGGAGCGTGTCAATCAGATGATTGAAGATTACGAGCCTTTTGAGGGTGAGCCTCTCTTGGACGCCAAGTGCTTCAATTGTTCTCACTCCTCAACTCACCATGTATCAGCTCTCTCTCTCTCCCCCCATCTGAAATCAGATCTTGAAGCTTTTTCCTGTGAAGCCATGGCCCTGGTTCTTGTACTAGAAACACAAGATGGTCCAATATTTGGGAGTCATGCTATTGCTCGCTATGTTGCTTGGTTGAAGACTGATAATGCTTTGTATGGACCTTATCTTAATGATTATTCTCAAATTGAACAGTGGAGTGACTTTTCCACAGTAGAGATTGATGCTATATTAACGCTTGGTGCTGACCTAGAATGGGACAAACCCTTTACCATCCTCCTGTAA 1797 0.4374 MILDPTRWAVRFFIRTLFRRLQNPRRLHFQLSLLNSPRRSTSAFGRTPALSCIRGGPFFCEAMALILHATKTNKNSYKILIAAEYSGVDVKLAPNFEFGVSNNTPEFIKMNPIGKVPVLETPDGPVFESNAIARYVARLKGDNALYGSSLMDYAHIEQWIDFSSLEIDANILTWFRPRIGRATYLPPVEEAAIFSLKRALGALNTHLTSNTYLVGHSVTIADIILTCNLFIGFTKLMTKSFTSEFPHVERYFWTLVNQPKFHKILGDVKQAETVIPIQSAQKPKEAKPKKEAQPKKETKKEAPKEAEKPKEAEKPKEAEKPKEAEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWLCDYKYNEENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWRKVDISDEAQKERVNQMIEDYEPFEGEPLLDAKCFNCSHSSTHHVSALSLSPHLKSDLEAFSCEAMALVLVLETQDGPIFGSHAIARYVAWLKTDNALYGPYLNDYSQIEQWSDFSTVEIDAILTLGADLEWDKPFTILL 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0392 598 CDD GST_C_EF1Bgamma_like 152 274 - -
Lele13g0392 598 Pfam Glutathione S-transferase, C-terminal domain 196 259 IPR004046 -
Lele13g0392 598 SUPERFAMILY GST C-terminal domain-like 135 274 IPR036282 -
Lele13g0392 598 MobiDBLite consensus disorder prediction 283 334 - -
Lele13g0392 598 Pfam Glutathione S-transferase, N-terminal domain 67 138 IPR004045 -
Lele13g0392 598 FunFam Elongation factor 1 gamma 142 278 - -
Lele13g0392 598 SUPERFAMILY Thioredoxin-like 61 147 IPR036249 -
Lele13g0392 598 Gene3D Glutaredoxin 61 136 - -
Lele13g0392 598 SFLD Glutathione Transferase (cytosolic) 67 252 IPR040079 -
Lele13g0392 598 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 334 493 IPR036433 GO:0003746|GO:0006414
Lele13g0392 598 FunFam Elongation factor 1-gamma 1 334 494 - -
Lele13g0392 598 FunFam Elongation factor 1B gamma 63 136 - -
Lele13g0392 598 Gene3D - 494 589 - -
Lele13g0392 598 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 63 144 IPR004045 -
Lele13g0392 598 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 334 494 IPR001662 GO:0003746|GO:0006414
Lele13g0392 598 MobiDBLite consensus disorder prediction 276 341 - -
Lele13g0392 598 SUPERFAMILY eEF1-gamma domain 334 493 IPR036433 GO:0003746|GO:0006414
Lele13g0392 598 SMART EF1G_2 333 441 IPR001662 GO:0003746|GO:0006414
Lele13g0392 598 Pfam Elongation factor 1 gamma, conserved domain 333 441 IPR001662 GO:0003746|GO:0006414
Lele13g0392 598 SFLD Main (cytGST) 67 252 - -
Lele13g0392 598 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 149 275 IPR010987 -
Lele13g0392 598 CDD GST_N_EF1Bgamma 67 139 - -
Lele13g0392 598 Gene3D - 142 279 - -
Lele13g0392 598 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 63 494 IPR044628 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0392 Lele-ChrLele13 16187014 16195903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0392 527 593 Eukaryotic Initiation Factors Gene Family AT1G57720 53.731 3.75e-12 66.6