Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0387 ATGGAAGATATTGCTACACAAGTGGCAACTCCTTTTTTCATACACCAATCTCTGCCTGCTCAATTTTGTGAGTCATCTGCAATGGCAAAGAAGCGTGATCTATCATATGTTGCCTCCTCCACCTTTCTTCAGCAACAGTTTCAAAACCCTATCGACAACTGGAATCCAAAGGGATGGGATTGGGATGCTGTCAGATTCGCTGCCAAACCGTTGGACACTAACAACCTTGAAGCGGGAGCTCCTGCACCCTCTATAAAAGACCAGCATACCAATTTCTACAACCACTCCGCTGTTGATGATGATGAGCATGAAGAAAGCCTTCGTTTGAAACTTGGTGGTTGCCCAGCCTTCAATACAGTGCTGGAGCCCATGTCCCGCCCGAGCAAAAGGTTACGTTCTCACTCACCTGGTGGACCCTCTTACCCTATGTGTCAGGTAGATGACTGTGAGGAAGATCTCTCCAATGCCAAAGACTATCACCGCCGACACAAAGTTTGTGAGGTTCATAGTAAATCTTCTAAAGCCTTCGTTGCTAACCAATCACAACGGTTCTGCCAACAATGTAGCAGATTTCACCTGCTGTCAGAGTTCGATGAGGGGAAGAGAAGTTGTAGGCGTAGACTTGCTGGTCATAATCGTCGCAGAAGAAAAACTCAACCAGAAGATGTTACCTCCCAGCTCCTCATTGCAAACCAGGATAATGCAACATCTAGGAATTTGGATATTGTCGACTTGTTGACTACAATTGCTGGTGCACAAGGGAAATTTGAGGAAAGAAGTAAACCTTGTTCACAACTTCCTCAGAAAGAGACGCTTGTTCACATCCTTGATAGGATAAATTCATTACCTTTGCAAGCTGACCTTGCTGCAAATTTGGCCAATGTTGGAAATTTATGTATGGGCAGTCTTGGGCAAACTTCTTCAAATCATAATGATAAATTGAACCAGAACAAATCTTCGCCATCAACTATGGACTTGCTTACTGTTCTTTCAGCAACTCTATCAGCATCTGCTCCTGAGGCCATTGCTTTACACTCTAAAAAATGCAATCCTAGTAGTGACAGTGAGAAATCTGGGACAAGTGTTGATGACCAAACAACTGAGCAAAGTCTACGGACAGGGCAACCATTAGAATTTACTTCAATTGGTGCAGAAAAAAGTAGTGGCAGTTACCAGTCGCCTGTTGAGCATTCAGTCAGCCAGGTTCAAGAGACTAAAAAAAATTTACCATTGCAGCTTTTTAGCTCCTCTTTAGATGATGAAAGCCAGCCAAAAATGCCATCTCAAAAGTATCTCTCATCAGACAGTAGTAATCCTATAGACATGTCACCATCGTCTTCTCCCTCTTGGGTACAGAAGCAGTTTGCTTCGCAGAGTATAACTGAAGGTATCAAGTCAGACAAAATTTTAACTGGAAGCGTGACCAATGCACACAAGGAAGCCAGCCAAAGCAATGACTGTGATATTTCTCTTGATCTTTTTGGAGGATCAAATAACAGAGTTCAACCTAGCTCTGTGCAAAGTGTTCCAGTTCAAGCTGGGTACACATCTTCAGGATCTGATCATTCACCTGCTAGTTTGAATTCAGATGCTCAGGGACGTACTGGTCAAATCATGTTCAAACTTTTTGATAAGGATCCTAGTCATTTCCCCGGAACACTGCGAACTCAGATATACAATTGGCTTTCTAATAGTCCTTCAGAGATGGAGAGCTACATAAGACCTGGCTGTGTGATCCTTTCAGTCTATGTTTCAATGTCTTCTTCTGCCTGGGAGCAACTAGAAGAAAATTTTGTTCAACATGTTCATTCTTTAATTCAAACTTCTGATTCTAAATTTTGGAGAAATGGGAGGTTTCTAGTTCGTGCTGGCAGTCAGTTAGCGTTATATAAAGATGGAAAGATACGCTATCGCAAAAGATGGAGAACATGGAGGTCTCCGGAGTTGATATTTGTCTCCCCTTTTGCAATTGTTGGGGGCCAAGAAACATCAATTTCATTGAAGGGTAGAAATCTGTCAACTTCTGGAACCAAGATTCATTGCACAAGTACAAGTTATTACACATCAAAGGAAGATGTAGGGTCTGTTTATTCGGGTATGACATATGATGAGATAAAATTGGGTGAATTTAAAGTACACAATGCATCTCCTGGTGTTCTTGGTCGTTGTTTCATTGAGGTTGAGAATGGTTTCAAGGGTAACAGTTTTCCAGTTATAATAGCTGATGCAACTATTTGTAAAGAATTGTGGTTACTTGAGTCTGAGCTTGTTAATGAGGCAAACTTAAGTGATGCCGTTGCTGAAGAGAACACTTGTGAATTTGCAAGGACTGGGTTAAGGGAAGAGTTTATGCAGTTTTTGAATGAGCTTGGCTGGCTATTCCAAAGGAAGAGATTCTCATATGCACAAGGGTTTCCAGTTTTTTCACTTGACAGGTTCAAATTTTTACTTACATTTTCTGTGGAAAGAAACTGTTCAATGTTAGTTAAAACCCTTATGGATATGCTGGTTGAGGAACACTTGGAAGGGGAATGGCTGTCCAAGGGATCGGTGGAGATGCTGAATGCAATTCAACTCTTAAACCGGGCTGTGAAAAGAAGGTATATAAAAATGGTTGACTTGCTTATCCACTATTTCATACCTAGCAAAAACGACACATCCAGGAAATATGTATTTCCGCCGCATCTAGAGGGACCTGCTGGTATTACACCCTTACATTTGGCTGCTTGCACATCAGGTTCTGAGGGTGTAGTTGACTCTTTGACAAATGATCCACAAGAGATTGGATTGAAGTGCTGGGAGTCTCTTGCGGATGCAAATGGGCAAACTCCTTATGCCTATGCTGTGATGAGAAATAATCACTCTTATAACACGCTGATTGCTCGTAAAATTGCTGGTAGAGAAAAATGCCAAGTTTCAGTAACAATTGAAACCGAGATAGAGCAGCCGTCGGTCAGTATTCAGCATAAAACAAGCCCAAGCAACGAAGTGGGACAAGGTCAGAAGAGATCTTGTTCTAAGTGTGCAGTTGCAGCAATGTACTACAACAGGAGGGTTTTGCGCTCACAGGGACTGCTTCACCGACCCTACATTCATTCGGTTCTCGCTATTGCTGCCGTTTGTGTATGCGTTTGTCTATTCTTCCGTGGAGCCCCTCACATAGGTTCAGTTGCACCCTTCAAGTGGGAAAATTTGGATTATGGCACATTGTAA 3213 0.423 MEDIATQVATPFFIHQSLPAQFCESSAMAKKRDLSYVASSTFLQQQFQNPIDNWNPKGWDWDAVRFAAKPLDTNNLEAGAPAPSIKDQHTNFYNHSAVDDDEHEESLRLKLGGCPAFNTVLEPMSRPSKRLRSHSPGGPSYPMCQVDDCEEDLSNAKDYHRRHKVCEVHSKSSKAFVANQSQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTQPEDVTSQLLIANQDNATSRNLDIVDLLTTIAGAQGKFEERSKPCSQLPQKETLVHILDRINSLPLQADLAANLANVGNLCMGSLGQTSSNHNDKLNQNKSSPSTMDLLTVLSATLSASAPEAIALHSKKCNPSSDSEKSGTSVDDQTTEQSLRTGQPLEFTSIGAEKSSGSYQSPVEHSVSQVQETKKNLPLQLFSSSLDDESQPKMPSQKYLSSDSSNPIDMSPSSSPSWVQKQFASQSITEGIKSDKILTGSVTNAHKEASQSNDCDISLDLFGGSNNRVQPSSVQSVPVQAGYTSSGSDHSPASLNSDAQGRTGQIMFKLFDKDPSHFPGTLRTQIYNWLSNSPSEMESYIRPGCVILSVYVSMSSSAWEQLEENFVQHVHSLIQTSDSKFWRNGRFLVRAGSQLALYKDGKIRYRKRWRTWRSPELIFVSPFAIVGGQETSISLKGRNLSTSGTKIHCTSTSYYTSKEDVGSVYSGMTYDEIKLGEFKVHNASPGVLGRCFIEVENGFKGNSFPVIIADATICKELWLLESELVNEANLSDAVAEENTCEFARTGLREEFMQFLNELGWLFQRKRFSYAQGFPVFSLDRFKFLLTFSVERNCSMLVKTLMDMLVEEHLEGEWLSKGSVEMLNAIQLLNRAVKRRYIKMVDLLIHYFIPSKNDTSRKYVFPPHLEGPAGITPLHLAACTSGSEGVVDSLTNDPQEIGLKCWESLADANGQTPYAYAVMRNNHSYNTLIARKIAGREKCQVSVTIETEIEQPSVSIQHKTSPSNEVGQGQKRSCSKCAVAAMYYNRRVLRSQGLLHRPYIHSVLAIAAVCVCVCLFFRGAPHIGSVAPFKWENLDYGTL 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0387 1070 SUPERFAMILY SBT domain 142 222 IPR036893 GO:0003677|GO:0005634
Lele13g0387 1070 Gene3D - 135 205 IPR036893 GO:0003677|GO:0005634
Lele13g0387 1070 FunFam Squamosa promoter-binding-like protein 14 136 205 - -
Lele13g0387 1070 Gene3D - 827 975 IPR036770 -
Lele13g0387 1070 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 89 858 IPR044817 GO:0003677
Lele13g0387 1070 MobiDBLite consensus disorder prediction 345 404 - -
Lele13g0387 1070 ProSiteProfiles Zinc finger SBP-type profile. 141 218 IPR004333 GO:0003677
Lele13g0387 1070 Pfam SBP domain 144 217 IPR004333 GO:0003677
Lele13g0387 1070 MobiDBLite consensus disorder prediction 353 404 - -
Lele13g0387 1070 MobiDBLite consensus disorder prediction 416 449 - -
Lele13g0387 1070 SUPERFAMILY Ankyrin repeat 860 956 IPR036770 -
Lele13g0387 1070 MobiDBLite consensus disorder prediction 501 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0387 Lele-ChrLele13 16133432 16138498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0387 1 1070 SBP-box Gene Family AT1G20980 50.323 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele13g0387 SBP 1.1e-28 No_clan