Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0380 ATGGTTTTTGAGTTGTTCTCTGACATTGCACCCTTCGCTGCAGAAAATTTCCGTGCTCTATGTACAGGAGAAAAGGGGGCAAGTCCTAAAACTAAAGAGCGACTGCGTTACATTGGTTGTTTCTTTCATGAGGTTGAGGAAGGTGGCAGCTATGTGAAGGGAGGCGCTCACTCCGAAACTGGTGAAGGTGGAGAAAGCATATATGGTCCATATTTCCCTGTTGATGAGCCAAATGAGCTTAAGCATGACAAAGAAGGGCTACTGTCTATGTCTCGACAAGATCGGGAAACATCTAGGCTTGATACCTTGTGGGCAATTGCAAAGTATGGTATCAATCATCCTCCTCAAATCTATCGTTCTGGTGTGTTATATAATGCCAGCCAAAGTCCTCCTAACGATGTGATGCGTTATCAGCCTGATGTGGCATTTTATCGGGAGAGAGCACAAATTGAACGGAAGACACCCTGTTTGATTTCTTCTCCTAAAGGGGAAAAAGAGGAAGGAGGAGCGAGTAAAGCTAGCTAA 525 0.4476 MVFELFSDIAPFAAENFRALCTGEKGASPKTKERLRYIGCFFHEVEEGGSYVKGGAHSETGEGGESIYGPYFPVDEPNELKHDKEGLLSMSRQDRETSRLDTLWAIAKYGINHPPQIYRSGVLYNASQSPPNDVMRYQPDVAFYRERAQIERKTPCLISSPKGEKEEGGASKAS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0380 174 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 121 IPR002130 GO:0000413|GO:0003755
Lele13g0380 174 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 95 IPR002130 GO:0000413|GO:0003755
Lele13g0380 174 Gene3D - 1 110 IPR029000 -
Lele13g0380 174 MobiDBLite consensus disorder prediction 154 174 - -
Lele13g0380 174 SUPERFAMILY Cyclophilin-like 1 97 IPR029000 -
Lele13g0380 174 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0380 Lele-ChrLele13 15910820 15912324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0380 1 98 U-box Gene Family AT5G67530 39.394 2.56e-09 53.5