Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0367 ATGTCAGAAATGCGGGTTTCTGATCTCCACTTGAAGAAGGAGCTCACTCAAATTCGCAAAGCTGCTCGTGTATTGAGGGATCCTGGTACTACTTCTTCGTGGAAGTCGCCACTTAGTTCGTCGAGATCTGTCGCGGCTGCTTCTGCTTCTGCATGGAAGAACAATGGCAACTCTCAACTTCATTCTCAGTTGTCTCTTCCGAGTGGAAGCAACAATGGGAAGGACAAGATGGTGTTTTTATACAATTGGAAGAATTACAAATCGTCAAGTGAGAAACACAATGGCGATGATAAAGACGAAGAAGAAGAAGAAGAGTTTGATGAAGATGGTGGTGGAAATGATGCATCTTCGTCTCTTCTGGGGAGTTTCGAGGATAGCCTCAGTGATGCTCGCAATGGTTGCGATTCAAAGAGCGATACTTGCTTAGGGGTTGGTGGGAGTGCGATTCGTTCTTCCATTTTCAGGTGTAAAGATGCAAATCCTGTTGCGTTGGGCACGCCATCGACCAGAAGAGCTCTGGAGATAAAGAAAAAGAGTAAGAAAAGCAAAAATTCCCATTTGGATATTCTAAGAAAATATCAGCAAAGAGAAACCAATCTCGGTAAAGCTTTAGTGAATCCCAACCATCATACTCATCGGTCAATAGCTTATAGCCGGGAGGACTCAGTTGGGCAGTCTGATGATACTGAAGATTACTGCAATTCGGAAGATTTAACACGAAACTCAGGGCCATCTCCTTTGCTTTTGAAGCTCAAGCATAAGAACTGGTCTCGCCCTAACTCTAAGTTGTTGAAAAGTAATAGAAAAGAGGATTCTTCTTATAGTACTCCTGCAATGTCTACCAGTTCTTACAATAGGTATGGTCAACATAATCCTAGTACTGTTGGATCCTGGGATGGCACGACAACCTCAGTAAATGATGCTGATGATGAAGTAGATGATCTTTTGGATTTGCCTGGTCGCCAAGGATGCGGGATACCTTGCTATTGGTCAAAGAAGACTCCAAAACATAGAGGGATGTGTAGGAGTTGTTATTCACCTTCACTTTCTGACACTCTAAGGAGGAAAGGAAGTAGCATGCTTTGTGGGAGTCAAACTATCTATCCTAGACACCGGAGATCCTTGTCAAGCTCTCAAAAGCGGAGAATTTCCTCAAGGAGTGCTCAAGGTGTCCTCCCATTGCTCACTAACAGTGATGATGTTAGAGGGTCATCTCGAGGAACTGGCATGAGCGATGATGAACTTTCTACAAACTATGGCGAGCTTGATCTTGAGGGTATAAGCAGGTTGGATGGAAGAAGGTGGTCCTCAAGTTGTAGGAGTCAAGAAGGATGGGAGATTGTAGCTTTCAATGGAGAAGGGGATGATGAAGGCACTCCAGAAAGTAGTAGGAGTTTCAGTCAAAAGTATAAGCCTATGTTCTTTAGTGAATTGATTGGGCAGAATATTGTGGTCCAGTCCCTTATAAATGCGGTTTCAAGAGGTCGAATTGCTCCCGTTTACCTTTTCCAAGGTCCCCGAGGAACTGGTAAAACATCAATGGCCAGGATTTTTGCTGGTGCATTGAATTGTATAGCTCCTGAAGAAACTAAACCTTGTGGCTACTGCAGGGAATGTACAAATTTCATTTCTGGGAAGAGCAGGGACCTTTTGGAAGTTGATGGAACCAGTAAAAAAGGGATTGATAGAGTTAGACATCTATTGAAAAGATTATCAGTTAGGACTTCTTCAGCCTCCTCACGATACATGGTCTTTGTTATTGATGAGTGTCATTTGTTACCCTCTAAGACATGGTTGGCATTTCTTAAATCTCTGGAAGATCTACCTCAGCGAGTTGTTTTCATATTTATAACAACAGATCTCGACAATGTGCCCCGAACCATACAATCTAGATGCCAGAAGTACCTTTTTAACAAAATTAAAGATGCAGATATAGTAGCACGGCTAAGGAAAATATCCGCGGAGGAGAACCTGGATGTCGAGACAGATGCGTTGGATCTTATTGCTATTAATGCAGACGGCTCACTTCGGGATGCAGAAACAATGTTAGAACAGCTGAGTTTGCTGGGAAAAAGAATTACTACTAGTCTTGTCAACGAACTTATGGGGGTTGTTTCAGATGAAAAATTACTGGAACTTTTGGAGTTAGCAATGTCATCAGACACTGCAGAAACAGTAAAAAGGGCCAGGGAATTGATGGACTCTGGAGTTGATCCAATTGTTTTGATGTCCCAAATGGCAAGCCTCATCATGGACATCATTGCTGGATCATATACTGTCATAGATGACAAACCTGGGGATTCATTTTTTGGCGGACGAAGTTTGAATGAATCGGAGTTGGAGAGATTAAAGCATGCTTTGAAGCTTCTCTCGGAGGCTGAGAAACAGTTAAGGACTTCTAGTGAACGCTCAACATGGTTCACGGCTACTCTGTTACAGCTTGGTTCGATTCCTTCAGCAGATATTACTCAGACCAGCAGCAGCAGGAGGCAGAGCAGCAAGACAATTGACGATGATCCATCAAGCGCTTCAAGAGAAGTAACTGCTCACAAGCACAAGCTAGATGTTCAGTGCAAGCCTCAGAAATCAACATCACCTGTATCTCTGCAGAAAGCTGTAAATAGCAATCCCAGCCACCAAAGGAAGTTATCATCAAAGTTTGATGGTTTCAGCTTGAATTCAAAGCCATCAAATAGCCCAGTTATGGATGATGATGCCACGCCTGTTTCATTTGATGATCATACGGTTAGTAATGTGACATTTAGATGCATAGATTCAGGGAAGTTATGTGATATCTGGGCACGTTGTATTGGAAGGTGTCACTCAAAGACATTGAAGCAGCTGCTACATAATCATGGAAAACTCGTATCTATATGTGAAGTTGAAGGTCTGCTGGTTGCATATGTTGCGTTTGAGGATGCAGATATTAAACTTAGGGCTGAAAGGTTTTTGAGCAGCATAACAAACTCCATGGAAATGGTTTTGAGACGAAATGTAGAGGTCAGAATTATCCACTTGCTTGATGATGAAGGTGAAGATCAGATCAATTTATTAGGCCCAAAACAGGCAGAATCAGTAATAGCAAATGAGAAGGAACATAGAGAAGGTCATACAAGAGGAAGAGATACTTCTTCTGATTTTCCTCCTTTGCTGGATGGAAACTTTCAGTCTACCAATGATTCGTCAGATTTACTGGTTGATGCAAATGGTACAAGGGAGAGACCAGATATTCCAATGCGAAGGATTGAATCCATTATTCGTGAGCAGAGGCTGGAAACTGCTTGGTTACAGGCTGTAGGAAAAGGCTCCCCAGGTTCATTAAGTTGCTTGAGACCTGAAAAGAATCAGGTCCTGCCTCAGGAAGGTATCTACTGTAAAGACCCAATAGAGTCCATGGACTCAACGAGGTTCTCCTCTCAGCATAGGGAAGATGACATCAGTAATGAAGTCAAAGTTTTGAAAGCTAACACTGGAAGGGTCCTACAGAAGGATCAGACTGGAATTGGAAGAATGGTCGACTGTTACTCCATGTCCCCTAGTTTATTGCATGATGGTAGTTTAGTAGCAACTTCCATCAGAGACAGTCTGGGATATGAATCAGGCCCAGGAGCAAGAGGTTGCAGTGGATTTTTGTGTTGGAACAACTCCAGCCGTAGAAGGGTAAAGGTAAAAGGTACCCCAGTGCGGAAAGTGGGACGCTTTTCATTGTTTAGTGAGTGTGGTAAGTCAAAGAGAAAGAGTTGA 3744 0.4284 MSEMRVSDLHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVAAASASAWKNNGNSQLHSQLSLPSGSNNGKDKMVFLYNWKNYKSSSEKHNGDDKDEEEEEEFDEDGGGNDASSSLLGSFEDSLSDARNGCDSKSDTCLGVGGSAIRSSIFRCKDANPVALGTPSTRRALEIKKKSKKSKNSHLDILRKYQQRETNLGKALVNPNHHTHRSIAYSREDSVGQSDDTEDYCNSEDLTRNSGPSPLLLKLKHKNWSRPNSKLLKSNRKEDSSYSTPAMSTSSYNRYGQHNPSTVGSWDGTTTSVNDADDEVDDLLDLPGRQGCGIPCYWSKKTPKHRGMCRSCYSPSLSDTLRRKGSSMLCGSQTIYPRHRRSLSSSQKRRISSRSAQGVLPLLTNSDDVRGSSRGTGMSDDELSTNYGELDLEGISRLDGRRWSSSCRSQEGWEIVAFNGEGDDEGTPESSRSFSQKYKPMFFSELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTSMARIFAGALNCIAPEETKPCGYCRECTNFISGKSRDLLEVDGTSKKGIDRVRHLLKRLSVRTSSASSRYMVFVIDECHLLPSKTWLAFLKSLEDLPQRVVFIFITTDLDNVPRTIQSRCQKYLFNKIKDADIVARLRKISAEENLDVETDALDLIAINADGSLRDAETMLEQLSLLGKRITTSLVNELMGVVSDEKLLELLELAMSSDTAETVKRARELMDSGVDPIVLMSQMASLIMDIIAGSYTVIDDKPGDSFFGGRSLNESELERLKHALKLLSEAEKQLRTSSERSTWFTATLLQLGSIPSADITQTSSSRRQSSKTIDDDPSSASREVTAHKHKLDVQCKPQKSTSPVSLQKAVNSNPSHQRKLSSKFDGFSLNSKPSNSPVMDDDATPVSFDDHTVSNVTFRCIDSGKLCDIWARCIGRCHSKTLKQLLHNHGKLVSICEVEGLLVAYVAFEDADIKLRAERFLSSITNSMEMVLRRNVEVRIIHLLDDEGEDQINLLGPKQAESVIANEKEHREGHTRGRDTSSDFPPLLDGNFQSTNDSSDLLVDANGTRERPDIPMRRIESIIREQRLETAWLQAVGKGSPGSLSCLRPEKNQVLPQEGIYCKDPIESMDSTRFSSQHREDDISNEVKVLKANTGRVLQKDQTGIGRMVDCYSMSPSLLHDGSLVATSIRDSLGYESGPGARGCSGFLCWNNSSRRRVKVKGTPVRKVGRFSLFSECGKSKRKS 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0367 1247 MobiDBLite consensus disorder prediction 1030 1071 - -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 97 111 - -
Lele13g0367 1247 Gene3D - 641 703 - -
Lele13g0367 1247 FunFam DNA polymerase III subunit gamma/tau 461 639 - -
Lele13g0367 1247 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 467 853 - -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 822 889 - -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 270 300 - -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 22 71 - -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 209 246 - -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 1049 1066 - -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 396 415 - -
Lele13g0367 1247 Pfam DNA polymerase III, delta subunit 480 640 - -
Lele13g0367 1247 Coils Coil 776 803 - -
Lele13g0367 1247 FunFam DNA polymerase III subunit gamma/tau 641 703 - -
Lele13g0367 1247 SMART AAA_5 497 659 IPR003593 -
Lele13g0367 1247 CDD AAA 479 637 - -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 859 889 - -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 89 121 - -
Lele13g0367 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 687 IPR027417 -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 832 858 - -
Lele13g0367 1247 Pfam DNA polymerase III subunits gamma and tau domain III 694 758 IPR022754 GO:0003887
Lele13g0367 1247 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 465 814 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lele13g0367 1247 MobiDBLite consensus disorder prediction 259 300 - -
Lele13g0367 1247 CDD HLD_clamp_pol_III_gamma_tau 640 703 IPR045085 -
Lele13g0367 1247 MobiDBLite consensus disorder prediction 29 71 - -
Lele13g0367 1247 SUPERFAMILY post-AAA+ oligomerization domain-like 711 812 IPR008921 GO:0003677|GO:0006260
Lele13g0367 1247 Gene3D - 456 638 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0367 Lele-ChrLele13 15720599 15727854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0367 461 763 Core DNA Replication Machinery Family AT1G21690 24.359 1.47e-15 77.8