LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele13g0346	ATGGATGGGAATGGAGTAGAGAGGGACCTGGAGATAGAGGGTGGCGGGGTGGCGATGATCATGGCGAATGATTATGGCAAACAAGACAGGGAAGACAATACGTCAGAATCAGAACCCTTTCTCCGAGAGCCTTTGCTTCTCAAGACCAATAGGATGAACAACACCTCGCAACTCGCCATTGTTGGAGCCAATGTTTGCCCTATTGAAAGTCTTGATTACGAGATCATTGAAAATGATCTATTTAAACAAGATTGGAGGTCTAGAACGAAGGTCGAGATATGCCAATATATTGTTCTTAAATGGACTCTTGCACTTCTAATTGGTTTGAGTACAGGGCTTGTTGGCTTTTTTAATAACCTTGCTGTTGAGAACATTGCTGGTTTCAAGCTTCTACTCACTAACAGTCTCATGCTCAAAGAAAAGTACTGCAGGTATTATCTGGCCTTCACGGCATTTGCCGGTTGTAACATGATTTTGGCCATTGCTGCGGCCATCCTCTGTGCCTACATTGCCCCCGCAGCAGCTGGGTCTGGCATACCCGAGGTGAAGGCCTACCTCAACGGTATAGATGCCCATTCTATATTGGCTCCAAGTACCCTCTTTGTAAAGATCTTTGGTTCAATTTTTGGTGTTGCTGCGGGGTTTGTTGTTGGTAAGGAAGGACCTATGGTACATACTGGTGCTTGCATAGCCAATTTGCTCGGACAAGGGGGTTCTCAAAAGTATCGGCTGACATGGAAATGGCTCAGATTCTTTAAGAATGATCGAGATCGAAGGGATTTGATCACATGTGGTGCAGCTGCAGGGGTTGCTGCTGCCTTCCGTGCTCCGGTTGGTGGCGTCCTTTTTGCGCTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTGTGGCGGACTTTCTTTACAACAGCAGTAGTAGCAGTAGTGCTGAGAGGTTTCATGGACTTGTGTCGGGGCGAAAACTGCGGTCTTTTTGGGGAAGGTGGGCTGATAATGTTTGATGTTAATGAAGCAAAGCCCGCATACAGCAGCCCTGATCTCCTGGCAGTTGTATTTCTGGGTGTCGTTGGGGGCATTTTGGGAGGCCTTTACAATTACCTTGTGGACAAGGTCCTTCGCACTTATAGCATCATAAACGAGAGAGGCCCTATATTTAAAATTGCACTTGTTGTCACAATCTCCTTTTTGACATCTTGTTGCGCATATGGCCTTCCATGGCTATCAAACTGCATCCCTTGTCCTCCTAACTTGGGGGACCAGTGCCCCACCGTAGGTCGCTCCGGCCACTACAAAAATTTTCAATGTCCGCCTAACCATTACAATGATCTTGCTTCTCTTGTTTTCACTACTAATGATGATGCCATCCGCAACCTCTTTATAGCAGGCTCAGACAAGGAGTTTAATCTCTCTACACTTCTAATATTCTTTGTTGCCATATACTTGCTTGGAATCATCACTTATGGAATTGCTGTCCCCTCTGGGCTATTTATTCCTGTCATACTTGCCGGGGCCTCGTATGGGCGCCTCGCTGGCAGTCTTTTAAGTCCATTCACCACACTCGATGTTGGATTGTTTGCCCTCCTTGGAGCCGCATCCTTCCTCGGTGGTACCATGAGAATGACTGTTTCTATTTGTGTCATACTCCTTGAACTCACTAATGACCTCCTTATGCTCCCATTGGTGATGCTGGTTCTTCTTGTTTCAAAGACTGTGGCTGATACCTTCAACAAAGGTGTATATGATCAGATGGTGAAAATGAAGGGGCTGCCTTATATGGAAGCACATGCTGAACCATACATGAGGCATTTAGTTGCAAGTGATGTTGTCTCTGGCCCTCTGATAACTTTTTCTGGGATTGAAAAAGTTGGGAATGTCATCCATGCTTTAAGTATTACTAGGCACCACGGATTTCCCGTGATCGACGAGCCTCCTTTCTCCGCTGCTCCCGAGTTGTGTGGTTTGGTTTTAAGGTCACATATTCTTGTGCTTCTTAAGAGGAAGAAGTTCACAAAGCAGAAGATGATGACTGGTTCTACCATTCTGAGAAACTTCAAAGCACGCGATTTTGCAAAGCCGGGGTTAGGCAAGGGCCTCAAGCTCGAGGATTTGGACATTTCAAAGGAGGAGATGGAAATGTATGTTGATCTCCATCCAATTACTAACACTTCACCGTATACAGTAGTTGAATCGATGTCCCTAGCAAAAGCTGCAGTTCTTTTCCGGGAGCTGGGCCTCAGGCACTTGTTGGTGGTGCCGAAGACACTCGCGAGACCTCCAATCGTTGGGATCTTGACAAGGCATGACTTCATGCCTGAGCACATTTTGGGACTATACCCTCATTTGGATCCACACAAGTAG	2361	0.4642	MDGNGVERDLEIEGGGVAMIMANDYGKQDREDNTSESEPFLREPLLLKTNRMNNTSQLAIVGANVCPIESLDYEIIENDLFKQDWRSRTKVEICQYIVLKWTLALLIGLSTGLVGFFNNLAVENIAGFKLLLTNSLMLKEKYCRYYLAFTAFAGCNMILAIAAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSQKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFMDLCRGENCGLFGEGGLIMFDVNEAKPAYSSPDLLAVVFLGVVGGILGGLYNYLVDKVLRTYSIINERGPIFKIALVVTISFLTSCCAYGLPWLSNCIPCPPNLGDQCPTVGRSGHYKNFQCPPNHYNDLASLVFTTNDDAIRNLFIAGSDKEFNLSTLLIFFVAIYLLGIITYGIAVPSGLFIPVILAGASYGRLAGSLLSPFTTLDVGLFALLGAASFLGGTMRMTVSICVILLELTNDLLMLPLVMLVLLVSKTVADTFNKGVYDQMVKMKGLPYMEAHAEPYMRHLVASDVVSGPLITFSGIEKVGNVIHALSITRHHGFPVIDEPPFSAAPELCGLVLRSHILVLLKRKKFTKQKMMTGSTILRNFKARDFAKPGLGKGLKLEDLDISKEEMEMYVDLHPITNTSPYTVVESMSLAKAAVLFRELGLRHLLVVPKTLARPPIVGILTRHDFMPEHILGLYPHLDPHK	786

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele13g0346	786	Pfam	Voltage gated chloride channel	160	574	IPR001807	GO:0005247\|GO:0006821\|GO:0016020\|GO:0055085
	Lele13g0346	786	FunFam	Chloride channel ClC3	92	411	-	-
	Lele13g0346	786	SMART	cbs_1	613	666	IPR000644	-
	Lele13g0346	786	SMART	cbs_1	724	775	IPR000644	-
	Lele13g0346	786	PRINTS	Plant CLC chloride channel signature	320	327	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Lele13g0346	786	PRINTS	Plant CLC chloride channel signature	444	460	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Lele13g0346	786	PRINTS	Plant CLC chloride channel signature	288	296	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Lele13g0346	786	PRINTS	Plant CLC chloride channel signature	302	312	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Lele13g0346	786	PRINTS	Plant CLC chloride channel signature	74	82	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Lele13g0346	786	SUPERFAMILY	CBS-domain pair	597	771	IPR046342	-

Showing 1 to 10 of 25 entries

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele13g0346	Lele-ChrLele13	15437204	15442943	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele13g0346	4	786	Ion Channels	AT5G49890	76.786	0.0	1180

Showing 1 to 1 of 1 entries