Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0327 ATGAGAGCTTTTCTGTTATTTGTTCCCTTATTTCTTCTACTTTGCTCTTCTTCTTCTTCTGTTTGTGGGTATTCATGGAATGAGCTAAAAGATCATCAAACACAACATGACTTTCTCAAGCTTTCTCTTCAACTTGACCAAGAGCGAGCCCTCAAGGGTCGTGCAAACACTCTTTCATTAGGCCCTAATTGTAGGAACTCTCGTGAGAAAGCTGCATGGGTTGATTGCATCGAGCTTTATGAGCAAGCCATCGATAAACTCAACAAAACCCTAAACCCCAACTCCAAGACTACGTTGCCTTTGATGTCCAACAATTTCACTAAGTTGTTGGGCTACACTTTAGCTCTCAACAAGGTTGAATACCAAGAAGAAGAAGCAAGTTATAAAGAAGGGTTTCCAACATGGGTTAAGCCTGGAGATAGGAAGTTGTTACAGTCTTCGTCTTCTAGGGCTAACATTGTAGTGGCTAAAGATGGATCTGGGAAATACAAAATTGTAAGAGAAGCTATAAATGCAGCACCAAAGAGTACTGTTGTTGGGGATGGATTTCTTGCTCAAGGCATCACATTTAGGAACACTGCTGGAGCTTCAAATCACCAAGCTGTTACACTTCGTTCTGATTCTGATTTATCTGTTTCATACAGATGCAGCTTCGAAGGATACCAAGACACTTTATATGTTCACTCTGAGAGACAATTCTACATAGAATGTGATATTTATGGCACTGTGGACTTCATCTATGGTAGTGTAGCAGTGGTTTTCCAGAACTGCAACATTTTTGCCAGAAACTCTCCAAACAAAATGAACACAATCACAGCTCAAGATAGCTTGATAAACGAGGCAGGTTGGTTGGAATGGAGTGGTAACTTTGCGTTGAACACTTTATATTATGGAGAGTCTGGTCTGGTTCATCCACTGCAAATCGAGTTAAGTGGTCAGAATAAGAAAGCTGGCGAAGTTTCGGAAACAAAACATGCAGCCGCCGATAATGAAGCAAGCGGCGATGAAGTTGGAGCCGGGAAGTTTTACTCCCACAGCCGCCAGGGTTCTGTTGCTGAGGACGAGGACGACGACGAGAAGACTAATCTTGAATTGGGTCCGCAGTGCTCCTTAAGGGAACAACTTGAGAAGGACAAGGATGATGAGAGCTTAAGGAAGTGGAAGGAACAACTTCTTGGGAGCGTCGACATCAACGCTGTTGGAGAAACCCTAGAGCCAGAGGTGAAGATAGTGAGCCTGGCAATAAAGGCAAATGGGAGAGATGATATAGTGCTTCCAATACCAGAGTCTGGGAAACCTGAGGGACTCTGGTTTACTCTGAAAGAAGGAAGCCAGTACAGGCTCATGTTCACTTTTCGTGTTGGCCACAACATTGTTTCTGGTCTCAAATACACCAACACTGTTTGGAAAACCGGTATCAAAGTTGACAGCACTAAAGAGATGATTGGAACGTTCAGTCCACAGGAAGAAGCTTATACACACGAAATGGCTGAAGAGACCACACCTTCTGGCATGTTTGCTAGAGGTACTTATACAGCTAAAAGTAAGTTTGTGGATGATGACAATAAATGCCACTTGGAGATCAACTACACTTTTGATATCCGAAAGGAATGGAATTAA 1620 0.4284 MRAFLLFVPLFLLLCSSSSSVCGYSWNELKDHQTQHDFLKLSLQLDQERALKGRANTLSLGPNCRNSREKAAWVDCIELYEQAIDKLNKTLNPNSKTTLPLMSNNFTKLLGYTLALNKVEYQEEEASYKEGFPTWVKPGDRKLLQSSSSRANIVVAKDGSGKYKIVREAINAAPKSTVVGDGFLAQGITFRNTAGASNHQAVTLRSDSDLSVSYRCSFEGYQDTLYVHSERQFYIECDIYGTVDFIYGSVAVVFQNCNIFARNSPNKMNTITAQDSLINEAGWLEWSGNFALNTLYYGESGLVHPLQIELSGQNKKAGEVSETKHAAADNEASGDEVGAGKFYSHSRQGSVAEDEDDDEKTNLELGPQCSLREQLEKDKDDESLRKWKEQLLGSVDINAVGETLEPEVKIVSLAIKANGRDDIVLPIPESGKPEGLWFTLKEGSQYRLMFTFRVGHNIVSGLKYTNTVWKTGIKVDSTKEMIGTFSPQEEAYTHEMAEETTPSGMFARGTYTAKSKFVDDDNKCHLEINYTFDIRKEWN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0327 539 Gene3D Coagulation Factor XIII, subunit A, domain 1 360 539 IPR024792 -
Lele13g0327 539 PRINTS RHO protein GDP dissociation inhibitor signature 458 474 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele13g0327 539 PRINTS RHO protein GDP dissociation inhibitor signature 517 534 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele13g0327 539 PRINTS RHO protein GDP dissociation inhibitor signature 475 490 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele13g0327 539 MobiDBLite consensus disorder prediction 317 366 - -
Lele13g0327 539 Pfam RHO protein GDP dissociation inhibitor 352 537 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele13g0327 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 14 118 IPR035513 -
Lele13g0327 539 SUPERFAMILY Pectin lyase-like 147 303 IPR011050 -
Lele13g0327 539 Gene3D - 176 284 IPR012334 -
Lele13g0327 539 SUPERFAMILY E set domains 347 539 IPR014756 -
Lele13g0327 539 Pfam Pectinesterase 177 275 IPR000070 GO:0030599|GO:0042545
Lele13g0327 539 FunFam Rho GDP-dissociation inhibitor 1 361 539 - -
Lele13g0327 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 119 IPR035513 -
Lele13g0327 539 PANTHER RHO GDP-DISSOCIATION INHIBITOR 345 539 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0327 Lele-ChrLele13 15185756 15193039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0327 1 299 Carbohydrate Esterase AT2G45220 39.434 1.92e-97 303