Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0319 ATGGCAGCGTTGTGTTTTCATCCACTCCGACTACCAAAATGGAAGAGGAAGACGTTATTACCGGCGTCTTCGTCGTCATCGTCTTCTTCGTCTGCGGCATCGTCGAAGAGGCAGTTGAATTGCGATGAGGAGAATTTGGAAAGGAAGAGATTCGATAGCTTGGAATCATGGTCGATGATATTGGAGTATGAGAACTTGGATTCGTGGAAGACTTCGAAGGATGATCAGGAAGAATGGACCGCCGATCTTTCTCAGCTTTTCATCGGAAACCGGTTCGCTTCCGGCGCTCACAGTCGGATTTATCGTGGAATTTACAAACAGAGAGCCGTGGCTGTGAAAATGGTTAGAATTCCGACTCAGGACGAGGACAAAAGAACTTTACTGGAGCAGCAATTTAAATCTGAAGTAGCTTTACTTTCCCGTCTCTTTCATCCTAATATTGTGCAGTTTATTGCAGCTTGTAAAAAACCATCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAAATCTGAGGATGTACCTGAACAAGAAAGAGCCATACTCGCTTTCAACCGAAACAATACTAAGATTAGCTCTTGACATATCTAGGGGAATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAATCTCATAATTTGCTTCTCAATGATGAGATGAGGGTTAAGGTAGCAGATTTTGGCACATCGTGCCTTGAAACGCGATGCCGGGAAAACAAAGGAAATATGGGGACATATCGTTGGATGGCGCCGGAGATGATCAAGGAAAAACCCTATACTCGGAAAGTTGATGTTTATAGTTTTGGAATTTTGCTCTGGGAGCTCGCCACTGCGTTACTTCCTTTCCAAGGAATGACCCCCGTTCAAGCTGCATTTGCTGTATCAGAGAAGGTAAGATCACTATGCCAAAGTTTCTTTCTTCTTAGGGAACCAAAGGCCACCCTTGCCGGAAAGTTGTCAGCCGGCGCTTGCACATCTGATAAAGCGTTGCTGGGCGGTGAATCCCTCGAAGCGGCCAGATTTCAGTGA 1041 0.4505 MAALCFHPLRLPKWKRKTLLPASSSSSSSSSAASSKRQLNCDEENLERKRFDSLESWSMILEYENLDSWKTSKDDQEEWTADLSQLFIGNRFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEDKRTLLEQQFKSEVALLSRLFHPNIVQFIAACKKPSVYCIITEYMSQGNLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSHNLLLNDEMRVKVADFGTSCLETRCRENKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGILLWELATALLPFQGMTPVQAAFAVSEKVRSLCQSFFLLREPKATLAGKLSAGACTSDKALLGGESLEAARFQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0319 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Lele13g0319 346 PRINTS Tyrosine kinase catalytic domain signature 202 220 IPR001245 GO:0004672|GO:0006468
Lele13g0319 346 PRINTS Tyrosine kinase catalytic domain signature 164 177 IPR001245 GO:0004672|GO:0006468
Lele13g0319 346 PRINTS Tyrosine kinase catalytic domain signature 267 289 IPR001245 GO:0004672|GO:0006468
Lele13g0319 346 PRINTS Tyrosine kinase catalytic domain signature 248 258 IPR001245 GO:0004672|GO:0006468
Lele13g0319 346 Pfam Protein tyrosine and serine/threonine kinase 89 303 IPR001245 GO:0004672|GO:0006468
Lele13g0319 346 Gene3D Transferase(Phosphotransferase) domain 1 169 318 - -
Lele13g0319 346 FunFam Serine/threonine-protein kinase isoform 1 76 168 - -
Lele13g0319 346 SUPERFAMILY Protein kinase-like (PK-like) 66 302 IPR011009 -
Lele13g0319 346 ProSiteProfiles Protein kinase domain profile. 86 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0319 346 SMART serkin_6 86 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0319 346 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 34 301 - -
Lele13g0319 346 MobiDBLite consensus disorder prediction 21 41 - -
Lele13g0319 346 CDD STKc_MAP3K-like 93 301 - -
Lele13g0319 346 Gene3D Phosphorylase Kinase; domain 1 75 168 - -
Lele13g0319 346 MobiDBLite consensus disorder prediction 21 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0319 Lele-ChrLele13 15077425 15080807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0319 1 301 MAP Kinase Kinase Kinase AT1G62400 80.464 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele13g0319 PK_Tyr_Ser-Thr 4.4e-55 CL0016