Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0312 ATGCCAAAAGAGATTCGACCTCTTCATTATTATTTTTATCATATAAATATCTCCCAAAATAATCTGATTGGAAACGTGCCCTACGTTTTGCACAATGATTTTCATGGTGACTTTAGTCACAACAAATTCAATGGAATATTACCATATGACTTATGCAGTTCCCCTTCCAAATGTAACATTGATTTGAGCTACAATAATATCTCTGGAAGTATACCTAGAGGACTTGGCAGGATGGAGTCTATCAACTTGTCATACAATCATCTCAGCGACTATGTTCCAAGTGAAGTTTATACCTCTTTTCCTCATGACATTTTATATGGCAATAAAGATTTACTTGGTCCAGAGAAGATACATGATTCTTCCAAAGAGCTTGCATACACGCTAGTTGTGACTGAAAAGTGCGATGTTTATAGTTTTGGAGTGGTGACGCTAGAAACAATGATGGGAAGACATCCTGGAGATTTGATATTGTCTCTGTCAAAGACCTGTACTAAAAGTATTTTGCTAAAAGACGTCTTAGATGCACGTCTTCCATTGCCAGAATGGAGAGATGCAGGAGATGTGACACTTTTGGTGACAATAGCATTAGAATGCTTGAATCCATCTCCCAAATCTCGACCATCAATGCAACATGTGTCCCAAAGGCTTTTATCCTCCAACCTGCCATTAGCCATTCCTTTCAATAATATATCACTCCAGCATTTAACGAATCAAGATATGCAAATAAGCTAA 732 0.3743 MPKEIRPLHYYFYHINISQNNLIGNVPYVLHNDFHGDFSHNKFNGILPYDLCSSPSKCNIDLSYNNISGSIPRGLGRMESINLSYNHLSDYVPSEVYTSFPHDILYGNKDLLGPEKIHDSSKELAYTLVVTEKCDVYSFGVVTLETMMGRHPGDLILSLSKTCTKSILLKDVLDARLPLPEWRDAGDVTLLVTIALECLNPSPKSRPSMQHVSQRLLSSNLPLAIPFNNISLQHLTNQDMQIS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0312 243 PANTHER LEUCINE RICH REPEAT KINASE 2 14 115 - -
Lele13g0312 243 SUPERFAMILY Protein kinase-like (PK-like) 123 224 IPR011009 -
Lele13g0312 243 Pfam Protein tyrosine and serine/threonine kinase 122 216 IPR001245 GO:0004672|GO:0006468
Lele13g0312 243 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0312 243 SUPERFAMILY L domain-like 14 94 - -
Lele13g0312 243 Gene3D Transferase(Phosphotransferase) domain 1 115 238 - -
Lele13g0312 243 Gene3D Ribonuclease Inhibitor 1 114 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0312 Lele-ChrLele13 14925607 14927173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0312 14 96 Receptor kinase-like Gene Family AT2G01210 27.193 4.02e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g0312 PK_Tyr_Ser-Thr 5.1e-06 CL0016