Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0305 ATGACATCGCGTTCGGGATTTAGCAATAGCACGGTCCGAGTGGGCAAGTACGAGTTGGGTCGGACTTTGGGAGAAGGCAATTTCGCCAAAGTGAAGTTTGCGCGCAACACACAGACGGGTGAAAATGTGGCCATCAAAATTCTTGACAAAGAAAAGCTTCTCAAGCACAAAGTGATTGGTCAGTCAAGGAAGGGGAGGTTGAAGGAAGATGAAGCCAGAAAATATTTTCAGCAGCTTATTTGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTTCCATAGAGACCTAAAGGAAGATGGTTTGCTGCACACAACATGTGGTACACCAAATTATGTTGCTCCAGAGGTGATCCACAACAAAGGTTATGATGGTGCGAAGGCCGATCTTTGGTCCTGTGGTGTTATTCTTTTTGTTCTAATGGCTGGGTTTTTGCCTTTTGAAGAAAGCAACCTTGTGGCTTTGTATAAAAAGATATTCAAGGCTGACTTCACGTGTCCATCATGGTTCTCTTCAAGTGCAAAGAAGTTAATTAAGAGAATTCTTGATCCCAATCCTGCTTCACTTTTCTTCCCTCTTAGCAGAAAACTTCAACTTTATTCTTATTTTGATGATCTAAAACAGCGAATTACAATGGCTGAGCTCATTGAGAACGAATGGTTTAAGAAGGGATATACGCCTCCTAGATTTGAGCAAGCGGATGTCAGTCTTGATGATGTAGATGCTATTTTTGGTGATTCAACGTGGGCTCTTGTTGCTGCCAGGAGAAACAAACCTAGCATTCGTAGATTGATACCTTTCCCGGTATCGTGGTCGGAACTCCCCTTGATGAACGATGCAAACAGCTCCAGTGAACTCAGCGGAGTTCGCGAGGGTGAGGTGGAAGATCCTTGCGGGGTTGCTCGGCCAAGAAATGGATCCGAGAGTTGGGAAATCCTACTATTGTTCTTGAATCGGGTTTGTGATTGTGGTTCGAAACTTCGACGTACCCCTTCCCTGAACCCCTTGGATTCTGAAAATCTTGTTGTAGAGAGGCGGGAAGAGGCACCAGGAGCACCTCTAACTATGAATGCATTTGAGCTTATCTCTACGTCACAAGGCCTCAACCTTAGCAGTCTTTTTGAGAAGCAAATGGTATTCAAGCTCTTTCTATTGGATATGTCCACTTCTGATAACATCTCTAACTATCCATTGCAGTTGAAGATTCAAGGTGAAAAGACTGGACGCAAAGGTCATCTATCTGTAGTGACTGAGGTGTTTGAGGTGGCCCCGTCACTTTGTATGGTTGAGATTCGCAAAGCTGAAGGAGACACTTTGGAATTTCATAAGTTTTACAAGAATCTGTCCACTGGACTGAAAGACGTTGTCTGGAAAGCGGATCCCATTGATGAAGAACCTGAAGGTAGGAGAGCATCAGCATAA 1419 0.4412 MTSRSGFSNSTVRVGKYELGRTLGEGNFAKVKFARNTQTGENVAIKILDKEKLLKHKVIGQSRKGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKEDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGFLPFEESNLVALYKKIFKADFTCPSWFSSSAKKLIKRILDPNPASLFFPLSRKLQLYSYFDDLKQRITMAELIENEWFKKGYTPPRFEQADVSLDDVDAIFGDSTWALVAARRNKPSIRRLIPFPVSWSELPLMNDANSSSELSGVREGEVEDPCGVARPRNGSESWEILLLFLNRVCDCGSKLRRTPSLNPLDSENLVVERREEAPGAPLTMNAFELISTSQGLNLSSLFEKQMVFKLFLLDMSTSDNISNYPLQLKIQGEKTGRKGHLSVVTEVFEVAPSLCMVEIRKAEGDTLEFHKFYKNLSTGLKDVVWKADPIDEEPEGRRASA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0305 472 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 58 - -
Lele13g0305 472 ProSiteProfiles NAF domain profile. 350 374 IPR018451 GO:0007165
Lele13g0305 472 Gene3D Phosphorylase Kinase; domain 1 3 64 - -
Lele13g0305 472 ProSiteProfiles Protein kinase domain profile. 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0305 472 SUPERFAMILY Protein kinase-like (PK-like) 13 223 IPR011009 -
Lele13g0305 472 Pfam NAF domain 352 382 IPR004041 GO:0007165
Lele13g0305 472 Gene3D Transferase(Phosphotransferase) domain 1 65 100 - -
Lele13g0305 472 Gene3D Transferase(Phosphotransferase) domain 1 101 257 - -
Lele13g0305 472 Pfam Protein kinase domain 102 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0305 472 CDD CIPK_C 356 453 - -
Lele13g0305 472 Gene3D Kinase associated domain 1, KA1 391 457 - -
Lele13g0305 472 Gene3D Kinase associated domain 1, KA1 350 390 - -
Lele13g0305 472 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Lele13g0305 472 SMART serkin_6 17 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0305 Lele-ChrLele13 14673389 14686726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0305 338 464 CBL-interacting serine-threonine protein kinases AT1G01140 48.322 6.13e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele13g0305 Pkinase 1.3e-15 CL0016