Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0301 ATGGGTCTCCCTGTAGACTGCTCTGTTCTCGATCTCAAATCCCGATTTGAGATCTACGGTGCCATCTCTGGCATACGCATCGACCGTGACAAAGGTGGCTATATTACCTATCAGACCAAGGAATCTGCCGATGCCGCTATGGCTGCTGCACTAGACCCATCTTTCGTCATCATTGTCACTCCGAAAAGGGATTTGATTGGGCTAGAAGGAGATGATCTCGACAGGTTTATGCCATATGTAGCAAACTAG 249 0.4819 MGLPVDCSVLDLKSRFEIYGAISGIRIDRDKGGYITYQTKESADAAMAAALDPSFVIIVTPKRDLIGLEGDDLDRFMPYVAN 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0301 82 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2 49 IPR000504 GO:0003723
Lele13g0301 82 CDD RRM_SF 2 42 - -
Lele13g0301 82 Gene3D - 1 56 IPR012677 -
Lele13g0301 82 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 65 IPR000504 GO:0003723
Lele13g0301 82 SUPERFAMILY RNA-binding domain, RBD 2 49 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0301 Lele-ChrLele13 14564491 14565468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0301 1 76 Homeobox Transcription Factor Family AT1G27050 51.316 7.58e-21 80.1