Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0258 ATGCTTAGCTGGACTGACACATATTACCCAATGATGTGTTTTCGCAACGGTGCAACTGGACCTATTGCTGCAGGAGTTGGTGCTGCTGCTCTATCTTTTACAGTTATTGCACTTGCATGTTATTACCGGAGAAGGATTCCAATTGCTTACTGCCGTAAAAGAAGACCGCCAGATTATGTCATTCATGTTTCTGCTGAGGAAGACCTTGAAGCTCACTTTGGTCAGCTTAAAAAGTTTCCCCTGCATGAACTTCAAGTTGCAACAGGCAACTTCAGTAACCAAAACTTTTTGGGTAGAGGTGGGTTTGGTAAGGTCTATAAAGGACGGTTGACTGATGGGTCTTTAGTTGCAGTGAAAAGGCTTAAAGAGGAGGGCACTCAGGGTAAAGATCTGCAATTTCAAACAGAAGTAATAATGATCAGCTTGGCTGTCCATCGTAATTTGCTCCGGCTGCGTGGTTTTTGCATGACACGAACTGAACGTTTGCTTGTGTATCCTTTCATGGCTAATGGCTGAGCTGCTAGGGGGCTTGCTTATTTACATGATGATTCCAGTCAAAAGATCATTCACCGTGGTGTTAAAGCCACAAATATATTGTTGGATGAAGAGTATGAAACAGTTGTTGGGGACTTTGGCTTGGCAAAACTTGTGCAATACGAAGATACTTATGTTACCACAGTTGTGCATGGTACAATTGGATTAACTTCTCTCAAAATCTTTCGACTTCAGAAAATCCTCGAGCAGAAAGAACTCCGAGCAATTCTTTTCCGGTCCGATTCTATTTTCCTCCACACCGATTTCTCTCCCACCGAACCCCGATTTCTGTTCCTCTTACCGCAAAAATTTTCCCATCTACTGATTCAGTTCAATGATTTTCAATCATGGGATATTCATCAAATCGAACGGTCAATGGCTCCCCAACCTCGTTCTTCAACCACAAAGTTCTTTGAACCTGGTGTTCGATTCTTCAATTATAGCATCCCTAACAGTTCAGAGCTCAAGTTATTTGTTTGTGTACCTCAAGAAAAGGAAGGAGAAATGAGGGTTGCAAAGTCTCAGTTTGAGCGCAACATAGAGACTGGTGAAAATGTTGCCAACAAAATTCTTGACAAAGAAAAGCTCCTTAAGCACAAAATGATTGGTCAGTTGAAGATTCAAGGGGAAAAGAGTGGACGCAAAGGTCATCTATCTATAATGACTGAGGTATTTGAGGCGGCCCCGTCACTTTGTATGGTTGAGATTAGCAAAGCTGGAGGAGATACTTTGGAATTTCTTAAGAAAGCGGATGCTATTGATGAAGAACCTGAAGGTTAG 1314 0.4209 MLSWTDTYYPMMCFRNGATGPIAAGVGAAALSFTVIALACYYRRRIPIAYCRKRRPPDYVIHVSAEEDLEAHFGQLKKFPLHELQVATGNFSNQNFLGRGGFGKVYKGRLTDGSLVAVKRLKEEGTQGKDLQFQTEVIMISLAVHRNLLRLRGFCMTRTERLLVYPFMANGXAARGLAYLHDDSSQKIIHRGVKATNILLDEEYETVVGDFGLAKLVQYEDTYVTTVVHGTIGLTSLKIFRLQKILEQKELRAILFRSDSIFLHTDFSPTEPRFLFLLPQKFSHLLIQFNDFQSWDIHQIERSMAPQPRSSTTKFFEPGVRFFNYSIPNSSELKLFVCVPQEKEGEMRVAKSQFERNIETGENVANKILDKEKLLKHKMIGQLKIQGEKSGRKGHLSIMTEVFEAAPSLCMVEISKAGGDTLEFLKKADAIDEEPEG 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0258 437 Gene3D Kinase associated domain 1, KA1 327 434 - -
Lele13g0258 437 ProSiteProfiles Protein kinase domain profile. 91 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0258 437 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524
Lele13g0258 437 Gene3D Phosphorylase Kinase; domain 1 60 167 - -
Lele13g0258 437 Pfam Protein kinase domain 174 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0258 437 Gene3D Transferase(Phosphotransferase) domain 1 169 252 - -
Lele13g0258 437 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 58 235 - -
Lele13g0258 437 FunFam Somatic embryogenesis receptor kinase 1 60 167 - -
Lele13g0258 437 SUPERFAMILY Protein kinase-like (PK-like) 72 233 IPR011009 -
Lele13g0258 437 Pfam Protein tyrosine and serine/threonine kinase 94 171 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0258 Lele-ChrLele13 12935568 12940457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0258 46 233 Receptor kinase-like Gene Family AT4G33430 65.421 2.49e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0258 PK_Tyr_Ser-Thr 6.1e-11 CL0016