Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0249 ATGATGTGTTTTCGCAACGGTGCAACTGGACCTATTGCTGCAGGAGTTGGTGCTGCTGCTCTATCTTTTACAGTTATTGCACTTGCATGTTATTACCGGAGAAGGATTCCAATTGCTTACTGCCGTAAAAGAAGACCGCCAGATTATGTCATTCATGTTTCTGCTGAGGAAGACCTTGAAGCTCACTTTGGTCAGCTTAAAAAGTTTTCCCTGCATGAACTTCAAGTTGCAACAGGCAACTTCAGTAACCAAAACTTTTTGGGTAGAGGTGGGTTTGGTAAGGTCTACAAAGGACGGTTGACTGATGGGCCTTTAGTTGCAGTGAAAAGGCTTAAAGAGGAGGGCACTCAGGGTAAAGAGCTGCAATTTCAAACAGAAGTAATAATGATTAGCTTGGCTGTCCATCGTAATTTGCTCCGGCTGCGTGGTTTTTGCATGACACGAACTGAACGTTTGCTTGTGTATCCTTTCATGGCTAATGGCTGATTCATTTATGCATATATGGTTTTCCCTCAATTGTCTTCTATTGTCTCATACCGCCCTAAATCAAAACCCCCTCTTGAATGGCCTGTACGAAAGCGAATTGCATTGGGAGCTACTAGGGGGCTTGCTTATTTACATGATGATTGCAGTCAAAAGATCATTCACCGTGGTGTTAAAGCCACAAATATATTGTTGGATGAAGAGTATGAAGCAGTTGTTGGGGATTTTGACTTGGCAAAACTTATGCAATACGAAGATACTCATGTTATCACAGTTATACATGGTACAATTGGGGATATTCATCAAATCGAACGGTCAATGGCTCCCCAACCTCGTTCTTCAACCACGAAGTTCTTTGAATCTGGTGTTCGATTCTTCAATTATAGCATCCCTAACAGTTCAGAGCTCAAGTTATTTGTTTGTGTACCTCAAGAAAAGGAAGGAGAAATGAGGGTTGCAAAGTCTCAGGTATTTGAGGCGGCCCCGTCACTTTGTATGGTTGAGATTAGCAAAGTTGGAGGAGATACTTTGGAATTTCTTAAGAAAGCGGATGCTATTGATGAAGAACCTGAAGGTTAG 1062 0.4209 MMCFRNGATGPIAAGVGAAALSFTVIALACYYRRRIPIAYCRKRRPPDYVIHVSAEEDLEAHFGQLKKFSLHELQVATGNFSNQNFLGRGGFGKVYKGRLTDGPLVAVKRLKEEGTQGKELQFQTEVIMISLAVHRNLLRLRGFCMTRTERLLVYPFMANGXFIYAYMVFPQLSSIVSYRPKSKPPLEWPVRKRIALGATRGLAYLHDDCSQKIIHRGVKATNILLDEEYEAVVGDFDLAKLMQYEDTHVITVIHGTIGDIHQIERSMAPQPRSSTTKFFESGVRFFNYSIPNSSELKLFVCVPQEKEGEMRVAKSQVFEAAPSLCMVEISKVGGDTLEFLKKADAIDEEPEG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0249 353 SUPERFAMILY Protein kinase-like (PK-like) 62 258 IPR011009 -
Lele13g0249 353 ProSiteProfiles Protein kinase domain profile. 81 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0249 353 Pfam Protein kinase domain 83 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0249 353 FunFam Somatic embryogenesis receptor kinase 1 50 157 - -
Lele13g0249 353 Gene3D Phosphorylase Kinase; domain 1 50 157 - -
Lele13g0249 353 FunFam Os07g0541700 protein 172 257 - -
Lele13g0249 353 Gene3D Transferase(Phosphotransferase) domain 1 171 274 - -
Lele13g0249 353 Gene3D Kinase associated domain 1, KA1 275 350 - -
Lele13g0249 353 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 48 262 - -
Lele13g0249 353 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Lele13g0249 353 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0249 Lele-ChrLele13 12592768 12597637 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0249 36 287 Receptor kinase-like Gene Family AT4G33430 64.683 6.92e-107 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0249 Pkinase 4.2e-24 CL0016