Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0227 ATGTGCAGCAGCATCTTTGGCTCAATAATCATGGACAACAATTATCATCAGGGCGATTTAACTGACATATTCCGTGCGAGTAGTGACGGTGGCGGCCGAGGCAGAGGAGGAGGTGGTGGTGGTTCATATGGTACTTCTTCTTCTTCTACATCTGAATTAGCTCCTCATGATCTCTCTTCTTCATCGGAAAGTTGGCAGCAGCACCATCACCACTACCAGCACCACCAGATGAATTTCTCGTCTGTAATAATGGAAGATTCCCTCAGAGCCAGCAACTTCTTCGGCGATCCCTTCTCAAACATGAAAGATCCCTTTCTTCAAGACCTTGATTTTCCCTTACCTTCTTCCTACTTCAGTTCTGATACTAATAATTCTGTCATGGAAGATGCATCTCCTTGTTTATCTTCTTCTTTTGTTGTTAATTTGTCTCATCATAACAAGCTTGAAGAAGATGATATAAGAATTAGGCCTCCTACTACGGCAGCTTGTAACAACACCACCACCATATTCTCCAACATGATTCAGATATCCCCCAACAGTATGAAGGCCGCCGACGCCAAGTTACTGCCGCCCGTGGTTTCGCCGTGTGATTCTTCTCCGGTGAATATGGCCGCCGTGAATTCTTCGTCTTCGTCGTCGTTGCCGCGGGGAATTGAGCCTTCTTCTTCTTTGGTTTCTGCAGGCAACATGAATATCACTATGGACAACGCGGCAGTGCAGATCTCGTCGCCAAGGAATCCGGGTCTCAAGCGAAGAAAGAGCCAGGCGAAGAAGGTGGTATGTATACCTGCACCAGCAGCTGCAAATAGCAGGCCAAGTAGTGGAGAGGTAGTTCCTTCTGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCATATCCAAGGGGTTACTACAGATGCAGCAGTTCCAAGGGTTGTTCAGCGAGAAAACAAGTAGAGAGAAGCAGGACAGACCCAAACATGCTGGTCATCACTTACACTTCAGAGCACAACCATCCATGGCCGACTCAACGAAACGCCCTCGCCGGCTCAACCCGGTCTCAGCCTTCCAACAACAACAACAAAAACAACAACAACGCATCTTCCAAGAACAACAGCAACAATTCCGATCAAGCTTCGATTGAGCCGCCCCGAGATGGCAGCGGCAACATGAAGCTGAAGATGGAGGAGGAGGATCATCATCATCAACAAGATGATCAGAGAGGGAAGAGATCAGCATCATCAGTTAAGGAGGAGATAGAGATAATGGAGATGGAAGATATAGTAGTGATGAACCAGAACGAACAAGAGCTTGAGAATATGATGATGGAAGATGGTAATACGGAAGGAGGAGGAGTGGGATACAAGCCATGTATGGTGGAGAGCAATAATAATAATCAGACGTCTGAGGATTTCTTTGCAGAATTGGGAGAGATTGAAGCTGACCCACTGAATCTCTTGTTCATTCATGCGGGTTACAATGAAGATCAGCATCATCAGCATCAGAGAGAATCAGCTTTAGATCCTTTCAATATCTTTGACTGGTCATCATCATCATCTGCATCAGCATCAGCAGATATTGACAACAAATTTGAAGAACCAAAGAGAGGGGTCAAGTATATGAAATATGAGGAAGCCTACCTCTGTATACTCTATGTGGCAACAGACCCTGATGAAACAATGTCGTACACTAGAGTTATGAGAGACTTCCACTTTCTCTATCTTGTTATTGCCCGGAACAACAGTCGGAGGTAA 1749 0.4574 MCSSIFGSIIMDNNYHQGDLTDIFRASSDGGGRGRGGGGGGSYGTSSSSTSELAPHDLSSSSESWQQHHHHYQHHQMNFSSVIMEDSLRASNFFGDPFSNMKDPFLQDLDFPLPSSYFSSDTNNSVMEDASPCLSSSFVVNLSHHNKLEEDDIRIRPPTTAACNNTTTIFSNMIQISPNSMKAADAKLLPPVVSPCDSSPVNMAAVNSSSSSSLPRGIEPSSSLVSAGNMNITMDNAAVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSNNNNKNNNNASSKNNSNNSDQASIEPPRDGSGNMKLKMEEEDHHHQQDDQRGKRSASSVKEEIEIMEMEDIVVMNQNEQELENMMMEDGNTEGGGVGYKPCMVESNNNNQTSEDFFAELGEIEADPLNLLFIHAGYNEDQHHQHQRESALDPFNIFDWSSSSSASASADIDNKFEEPKRGVKYMKYEEAYLCILYVATDPDETMSYTRVMRDFHFLYLVIARNNSRR 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0227 582 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 83 486 IPR044810 GO:0003700
Lele13g0227 582 Gene3D WRKY domain 252 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g0227 582 SUPERFAMILY WRKY DNA-binding domain 277 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g0227 582 MobiDBLite consensus disorder prediction 387 414 - -
Lele13g0227 582 SMART WRKY_cls 279 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g0227 582 FunFam probable WRKY transcription factor 14 252 333 - -
Lele13g0227 582 MobiDBLite consensus disorder prediction 26 71 - -
Lele13g0227 582 MobiDBLite consensus disorder prediction 41 62 - -
Lele13g0227 582 MobiDBLite consensus disorder prediction 296 414 - -
Lele13g0227 582 MobiDBLite consensus disorder prediction 323 381 - -
Lele13g0227 582 Pfam WRKY DNA -binding domain 281 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g0227 582 ProSiteProfiles WRKY domain profile. 274 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0227 Lele-ChrLele13 9756948 9761064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0227 1 528 WRKY Transcription Factor Family AT1G30650 40.485 3.84e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele13g0227 WRKY 3.6e-25 CL0274