Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0212 ATGGAACAGTACGAGAAAGTCGAGAAGATAGGTGAAGGCACCTATGGTGTGGTCTACAAGGCTCGGGATAGCGTCACAAATGAGACCATAGCATTGAAGAAAATTCGATTGGAGCAGGAAGATGAGGGAGTGCCTAGCACTGCGATTCGAGAGATTTCTCTCTTGAAAGAGATGCAGCATAGGAATATTGTTAGGTATACTGGCGTCTGA 210 0.4571 MEQYEKVEKIGEGTYGVVYKARDSVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRYTGV 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0212 69 SUPERFAMILY Protein kinase-like (PK-like) 1 68 IPR011009 -
Lele13g0212 69 PANTHER CELL DIVISION PROTEIN KINASE 1 67 - -
Lele13g0212 69 ProSiteProfiles Protein kinase domain profile. 4 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0212 69 Pfam Protein kinase domain 4 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0212 69 Gene3D Phosphorylase Kinase; domain 1 1 69 - -
Lele13g0212 69 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele13g0212 69 FunFam Cell division related protein kinase 2 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0212 Lele-ChrLele13 8464518 8464816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0212 1 69 Core Cell Cycle Gene Families AT3G48750 89.855 1.30e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele13g0212 Pkinase 3.2e-17 CL0016