Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0183 ATGAGACTATCTTCATCTAGTTTTAGCCCTCCGCCTCCGGAAGGAGAAAAGCGAGTCCTGGATTCAGAACTTTGGCATGCATGCGCTGGCCCTCTTGTTTCCTTACCAGCAGTTGGAAGTCGTGTCGTCTACTTTCCTCAAGGTCACAGTGAACAGGTTGCTGCGTCTACCAACAAGGAAGTGGATGCCCATATTCCTAATTACCCTAGCTTGCCTCCGCAGCTTATTTGTCAGCTTCATAATGTGACCATGCATGCGGATGTGGAGACAGATGAAGTATATGCTCAGATGACCTTGCAAGCTCTAAATCCTCAAGAGCAGAAAGAGGCATACCTTCCAGCAGAGTTGGGCACTCCTAGTAAGCAGCCAACAAATTACTTCTGCAAAACTTTGACAGCCAGTGACACAAGTACACATGGGGGATTCTCTGTGCCACGCCGAGCAGCTGAGAAAGTGTTCCCACCTCTGGACTTCTCCCAACAACCTCCTTGTCAAGAGTTAATTGCTGGGGATTTGCATGGTAATGAATGGAAATTCAGACATATCTTTCGTGGTCAACCCAAAAGGCATCTACTTACAACAGGATGGAGTGTGTTTGTGAGTGCTAAAAGGCTTGTTGCTGGTGATTCAGTCCTGTTTATCTGGAATGAAAAGAATCAGTTGCTTCTTGGTATCCGGCGTGCAAATCGCCCACAAACTGTGATGCCTTCATCAGTGTTATCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCCGCTGCTCATGCAGCCTCAACAAACAGTCGTTTTACCATTTTCTATAATCCACGCGCTAGTCCATCTGAATTTGTCATACCCTTATTCAAGTATGTTAAAGCTGTGTATCATACTCGAGTCTCAGTTGGCATGCGCTTCAGGATGCTGTTTGAAACTGAGGAATCAAGTGTGCGGAGATACATGGGCACCATAACTGGTATTAGTGACCTGGATCCTGTTCGATGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCTACAGCAGGAGAGAGGCAACCTAGAGTGTCCCTATGGGAAATTGAACCATTAACAACATTTCCGATGTATCCATCATCTTTTCCTCTTAGGCTTAAACGACCATGGCCTCCAGGATTGCCTTCTTTCCAGGGCATGAAGGATGACAGTTTTAACTTAAGTAATCAACTATTATGGCTTCGAGACACTACAGACAGAGGTCTTCAGTCTCTTAACTTCCAGGGGTTTGGGTTCAATCCTTGGATGCAGCCAAGGCTCGATCCCTCCATGTTGACTTTGCCAACTGACATGTACCCAGCTATGTCTAATACTGCAGTTCAGGATATGAGGACTTTGGATCCTTCCAAACAGCATCCTTCATCTTTTCTTCAATTTCAGCCACAGAACTTCCCCAATAGGACTGCTGCTTTAAGGCAGGCTGAAATGTCCCAGCAGTCTCAATTGCAGCAGGCTTGTCAAAGCAATCAAGAGAATCAGAATTCTTCTCAATCCTTGGCTCCAACTCAGATGCAACTTCAGCAGCAGCACTCATTCAATAATCAGCATCAGCAGCCACAGCAAGTGGTTGATCATCAGCAGATTTCAAGTGCTTCTGCAATGTCTCAGTTTGTATCTACTCCACAACCCCATTCACCATCCATGCAAGCTATGTCTTCGCTTTGCCAACAGCAGAACTTTTCTGATTCAAACTTGAATTCCATGAATTCATCTATAGTTTCTCCCTTGCACAGTATCTTGGGTTCATTTTCCCAGGATGAATCATCCCACCTTCTCAACCTACCCAGGACTAGCTCTTGGGTACCTGTTCAAACATCCACTGCCTGGCCCTCCAAGCGTGTTGCAGTGGATCCTCTGCTTTCTTCTGGAGCTTCTCAGTGCACTCTGCCTCAGTTGGAGTTGTTAGGGCAGCCACAAAGTACTATGTCACAGAATGTCATTTCATTGCCACCTTTTCCTGGTCGGGAGTGTTCAATAGATCGAGAAGGGAGCACTGATCCTCAGAACAATCTTTTATTTGGTGTCAATATAGAGCCCTCATCTCTTATAGTGCAGAATGGGATGCCAAGCCTCAAGGGAGTTGGCAACAACAATGACTCTGGGATTGAGCCATTTCAGTCATCTAATTACCTGGATACTGCACTAACTGATTCTTCATTGAATCATGTAATTACACATAGCATCGCTGAATCAAACTTCCTTGAGATTCCAGATAATGGGGGTCAAGGAAACCCACAAAACAAAACCTTTGCCAAGGTTTACAAGTCAGGGTCCTGTGGAAGATCATTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGTAGTGAACTTGCCCGAATGTTTGGCCTTGAAGGCAAGTTAGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGACGTTCTTCTCCTCGGTGATGGCCCCTGGCCGGAATTCGTAAGTAGTGTATGGTGTATCAAAATACTTTCTCCCCAAGAAGTGCAGCAAATGGGCAACAATGGACTTGAGCTTCTGAACTCAGTCCCGATTCAGAGGCTCTCTAATGGCGTCTGCGATGCCCATGCGAGCCGTCCTGACCCAAGAAATTTAAGCACTGGGATAGCAACCAATGGTGTGACAATCTAG 2664 0.461 MRLSSSSFSPPPPEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQALNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIAGDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLFKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPPGLPSFQGMKDDSFNLSNQLLWLRDTTDRGLQSLNFQGFGFNPWMQPRLDPSMLTLPTDMYPAMSNTAVQDMRTLDPSKQHPSSFLQFQPQNFPNRTAALRQAEMSQQSQLQQACQSNQENQNSSQSLAPTQMQLQQQHSFNNQHQQPQQVVDHQQISSASAMSQFVSTPQPHSPSMQAMSSLCQQQNFSDSNLNSMNSSIVSPLHSILGSFSQDESSHLLNLPRTSSWVPVQTSTAWPSKRVAVDPLLSSGASQCTLPQLELLGQPQSTMSQNVISLPPFPGRECSIDREGSTDPQNNLLFGVNIEPSSLIVQNGMPSLKGVGNNNDSGIEPFQSSNYLDTALTDSSLNHVITHSIAESNFLEIPDNGGQGNPQNKTFAKVYKSGSCGRSLDITKFSSYHELRSELARMFGLEGKLEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVSSVWCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGVCDAHASRPDPRNLSTGIATNGVTI 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0183 887 Gene3D - 291 363 - -
Lele13g0183 887 SUPERFAMILY CAD & PB1 domains 769 830 - -
Lele13g0183 887 FunFam Auxin response factor 125 229 - -
Lele13g0183 887 ProSiteProfiles PB1 domain profile. 755 839 IPR000270 GO:0005515
Lele13g0183 887 FunFam Auxin response factor 291 363 - -
Lele13g0183 887 Gene3D - 125 228 IPR015300 -
Lele13g0183 887 MobiDBLite consensus disorder prediction 478 527 - -
Lele13g0183 887 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lele13g0183 887 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 844 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele13g0183 887 Pfam AUX/IAA family 751 840 IPR033389 -
Lele13g0183 887 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lele13g0183 887 SMART B3_2 127 229 IPR003340 GO:0003677
Lele13g0183 887 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele13g0183 887 Gene3D - 751 844 - -
Lele13g0183 887 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Lele13g0183 887 CDD B3_DNA 126 227 IPR003340 GO:0003677
Lele13g0183 887 FunFam Auxin response factor 750 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0183 Lele-ChrLele13 4666295 4671981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0183 1 483 B3 DNA Binding Superfamily AT1G30330 83.436 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele13g0183 AUX_IAA 4e-06 CL0072