Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0167 ATGGAACTATCGAAATTGGCTGCAGCATCTCCCTACAAGGAGATATCAGCCAGATGGGATCCAGATGGAGCATGCTTGCCTGTAATTGATGAAGCACCTGTATTTTATCCGACCGCTGAGGAGTTTGTGGACACCCTTGGTTACATAGCAAAGATACGCCCCCTGGCTGAACCACATGGCATATGTAGGATAGTCCCTCCACCTTGCTGGATTCCGCCCTGCCCTCTTAAGGAGAAAGATATTTGGGAAAATGCTAAATTTCCCACCCGTATTCAGCAGATTGACTTGCTTCAGAATAGAGAGCCAATGAGAAAGAAAAGCAGGGGAAGGAAACGAAAACGTAGAAAGAACTCTAAAATGACAACATGTAGAAGACTTGCCAATCCAGATTCAGAAGTCAGTGCTTCTGAATCTGAAGAAAAATTTGGATTCCAATCAGGACCAGACTTAACACTTCAAGACTTTCAACAATATGCTGCTTTTTTTAAAGAATGCTACTTTGGGATGAAGGATAGCAAAGACGATGGACAAATCTGTGATAATAATTATCAGAAAATATTGGAGCCCTCTGTGAAGGAAATTGAAGGTGAATACTGGCGAATAATTGAGCAACCAACTGATGAGGTCGAGGTGTACTATGGAGCTGACCTAGAAACTGGGGCACTTGGAAGTGGTTTTCCAAAGGCTGATTCCTCAGCTAAGGGCTACTTGGATGAATATACACTATCTGGCTGGAATCTGAATAACTTCCCAAGGCTTCCTGGTTCTGTGCTAAGTTTTGAAGGAAGTGATATCTCAGGAGTTCTAGTGCCTTGGCTATATGTTGGGATGTGTTTTTCATCATTTTGCTGGGATCATCACCTTTATTCGCTAAATTATTTGCACTGGGGTGATCCAAAAGTATGGTATGGAGTACCTGGCGGCAATGCTACAGCTTTGGAGGGTGCGATGAGGAAGCATATGCCTGATTTGTTTGAGGAGCAACCTAATTTACTCAATGAACTGGTCACTCAACTATCACCTTCAATTCTTAAATCTGAGGGAGTGCCTATATTTAGCACTGTCCAGCATTCTGGGGAATTTGTAATTACCTTTCCAAGAGCATACCATGCTGGTTTCAATTGTGGTTTCAACTGTGCAGAGGCCGTGAATGTTGCTCCTGTAGATTGGTTACTGCATGGACAGAATGCTGTTGAACTTTATAGTAAGCAGCGCCGTAAAACCTCATTGTCCCATGACAAATTGTTATTAGGATCAGCTCAGGAAGCTATACAAGCCCTTGCAGAGGTCGCTCTTGAAGGAAAGGAAACTCCAAAAAATTTGAAATGGAAAAGCGTCTGTGGGAAAGATGGTGCTCTTACTAATGCAGTTAAGAAAAGGATGAAGATGGAGGAAGAGCGGATACAATGTCTTCGAACTCCCATAAAATTGGTGAAAATGGACATCAACTTTGATTTGGATAAGGAAAGAGAATGCTTTGCTTGCTTCTATGATTTGCACCTTTCTGCTGTAGGGTGCCAATGCTCTGTTGATAAATACTCTTGTCTAAGGCACTCAAATTCGTTTTGCTCATGTGAATATGATGAAAGATTTGTTCTATTTCGTTATACTATAGAGGAGCTAAAAGAGTTGGTTAGAGCATTAGAAGGAGAAATAGAAGCTATCAAGGTTTGGGCAAATAGGACCTCTAGAATGGTTTCTGTAGATGCCGGGGGCGTTTGTTTAGATAAGCCATATGTGGACAGAGACATGTGCAAAACTAAGAGCAATGAAGTGGAAAGTTCATCTTCTTGTCCAAGAATCAAGAAGTCAAAACTAAATGAAGATCCTCACAGTCATGTTTCTTCAGAATTAGTCCAGTTTGATTCCCAAGTGGAAAGTGCACCACAACGCATTGTAGATGGTCATAATGGCAACGTTAATGCCAAAAGTTTGGTCACAGATAATGAAATTAAGGTTGCATGGAATTGTTGTATGGGATTAAATCTCAATGTTATGTCTGGTGAAAATGAAAGTTTTATCCTGCATATTGCTGATAGCAAATCAAACAAGGGTATTGGTTGTGTTGAAAAAGTCTGTTACCCATGCTCACAAAAGGAACAAGATGATGTGGTACTTGATGGTGTTGGAAATGTATCAAGCATGTTTTCTCCTGCTAAGAAAGTTTACCCATCGTGTTCTACGGGTGATCGCACTTCTAGTAAATTTGATGGTGGCAAGATGTCTGGGGATGATCTATTAGTGCATCAGGGTATGAGAGTTCTACCTAACAGTGGATGTAAAATGGAAACAATAGACAGTTTCAATGAAAGTACATCTTTGACAAGCCAAAGCTTTCTAATTCAGAAGTTTGCTACATCGGTTGAGCTTGTGAGCCTGGGCTCCATTCTGCATGGAAAGCTGTGGAGCAGTAAGCACATGATATACCCGAAAGGTTTCAAGAGTCGTGTCAAGTTCTTTAGCATGCTTAATCCATCAAGAATCTGTAGCTATGTTTCTGAAGTTCTTGATGGTGGCTTGATTGGACCTCTTTTCAAGACTGGTTATAGAATCGAGCTAATGTTTTCTGAGTTTCTTCGTTTTGGGTCTGCTCTAGAAGATGGTGAAAAACTTGGTTTCAAGGTTAGCATGGAAGAGCATCCAAGTGAAAGTTTTATGAGCATGTCGGCAGAGAAGTGCTGGGAATCAGTCCTGGAGGGAGTAAATCGTGAGAACATAGGGCGCAGAAGCCTAGGGGAAATAATACTTCCTCCATTGAAGCTTCTGCAAAGCATCAATGGTTTACAAATGTTCGGTTTCCTTTCTCCATCAATTATCCAGGGTATTGAAGCTCTGGATCCCAGTCATCAATGCGCTGAGTACTGGAATCACAAGGAATTAATCTCTTCTGTATCTTCCAGTAGTACTGGCGATGAAGTTAAGCTCGTGCGTGGCAGTTCTAGTAGCCTGTCTGATGACGTGAAGACCAAAGTTTTCGGCATCGATTTGACGAAGCGGGATGAAAATGATGAAGAAATGATAGGAGCGGTGAAACATGACTCTTTCGAAGGGATGAAACTTGTACTCGAAGGGTTGTTGAAGAAAGCGAGCGTGAATGAGTTGAGCACAATGCTGAAGTTATTGGGGTCAGATGATGCAGAAAGTTCTCAGTGGAGAGTGGAAATTGCAGCTCTGATAGAGGAGATCCAGAAAAGCTTGTAG 3201 0.4174 MELSKLAAASPYKEISARWDPDGACLPVIDEAPVFYPTAEEFVDTLGYIAKIRPLAEPHGICRIVPPPCWIPPCPLKEKDIWENAKFPTRIQQIDLLQNREPMRKKSRGRKRKRRKNSKMTTCRRLANPDSEVSASESEEKFGFQSGPDLTLQDFQQYAAFFKECYFGMKDSKDDGQICDNNYQKILEPSVKEIEGEYWRIIEQPTDEVEVYYGADLETGALGSGFPKADSSAKGYLDEYTLSGWNLNNFPRLPGSVLSFEGSDISGVLVPWLYVGMCFSSFCWDHHLYSLNYLHWGDPKVWYGVPGGNATALEGAMRKHMPDLFEEQPNLLNELVTQLSPSILKSEGVPIFSTVQHSGEFVITFPRAYHAGFNCGFNCAEAVNVAPVDWLLHGQNAVELYSKQRRKTSLSHDKLLLGSAQEAIQALAEVALEGKETPKNLKWKSVCGKDGALTNAVKKRMKMEEERIQCLRTPIKLVKMDINFDLDKERECFACFYDLHLSAVGCQCSVDKYSCLRHSNSFCSCEYDERFVLFRYTIEELKELVRALEGEIEAIKVWANRTSRMVSVDAGGVCLDKPYVDRDMCKTKSNEVESSSSCPRIKKSKLNEDPHSHVSSELVQFDSQVESAPQRIVDGHNGNVNAKSLVTDNEIKVAWNCCMGLNLNVMSGENESFILHIADSKSNKGIGCVEKVCYPCSQKEQDDVVLDGVGNVSSMFSPAKKVYPSCSTGDRTSSKFDGGKMSGDDLLVHQGMRVLPNSGCKMETIDSFNESTSLTSQSFLIQKFATSVELVSLGSILHGKLWSSKHMIYPKGFKSRVKFFSMLNPSRICSYVSEVLDGGLIGPLFKTGYRIELMFSEFLRFGSALEDGEKLGFKVSMEEHPSESFMSMSAEKCWESVLEGVNRENIGRRSLGEIILPPLKLLQSINGLQMFGFLSPSIIQGIEALDPSHQCAEYWNHKELISSVSSSSTGDEVKLVRGSSSSLSDDVKTKVFGIDLTKRDENDEEMIGAVKHDSFEGMKLVLEGLLKKASVNELSTMLKLLGSDDAESSQWRVEIAALIEEIQKSL 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0167 1066 Gene3D Cupin 17 386 - -
Lele13g0167 1066 Pfam F/Y rich C-terminus 872 957 IPR003889 GO:0005634
Lele13g0167 1066 ProSiteProfiles JmjN domain profile. 32 73 IPR003349 -
Lele13g0167 1066 SMART JmjN_1 31 72 IPR003349 -
Lele13g0167 1066 Pfam jmjN domain 33 66 IPR003349 -
Lele13g0167 1066 MobiDBLite consensus disorder prediction 98 140 - -
Lele13g0167 1066 SMART cupin_9 239 402 IPR003347 -
Lele13g0167 1066 Pfam C5HC2 zinc finger 492 544 IPR004198 -
Lele13g0167 1066 ProSiteProfiles FYR domain FYRC motif profile. 868 958 IPR003889 GO:0005634
Lele13g0167 1066 Pfam JmjC domain, hydroxylase 272 385 IPR003347 -
Lele13g0167 1066 MobiDBLite consensus disorder prediction 104 121 - -
Lele13g0167 1066 SMART fyrn_3 794 838 IPR003888 GO:0005634
Lele13g0167 1066 PANTHER LYSINE-SPECIFIC DEMETHYLASE 27 680 - -
Lele13g0167 1066 Pfam F/Y-rich N-terminus 787 835 IPR003888 GO:0005634
Lele13g0167 1066 MobiDBLite consensus disorder prediction 122 140 - -
Lele13g0167 1066 SMART fyrc_3 872 970 IPR003889 GO:0005634
Lele13g0167 1066 SUPERFAMILY Clavaminate synthase-like 236 424 - -
Lele13g0167 1066 ProSiteProfiles JmjC domain profile. 239 402 IPR003347 -
Lele13g0167 1066 ProSiteProfiles FYR domain FYRN motif profile. 780 838 IPR003888 GO:0005634
Lele13g0167 1066 Gene3D - 785 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0167 Lele-ChrLele13 2673984 2680922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0167 782 996 JUMONJI Transcription Factor Family AT1G30810 44.651 4.81e-45 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele13g0167 JmjC 1.8e-38 CL0029