Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0165 ATGGAGATATCTTCGGGACAGAGGCCAAGCAACAGCAAGAACGGCAACACTTCTCGAAAGCGACCTAAGATAACCATTCGCTACAGTAGTAGAATGAACGAACGACATGTCGTAGAGTACCAAGGTGGAAGGACCGAGAACGAAGATCCAGAAAACGATGCCGGAGAAGGAACGGAACGACAGATTGAAGAGACTGAAGAAGAAGATGAAGAAGAAGAAGCGGAAGACTGCGAAGAATACGATGACGGCGATGAGTCATCCTCTGGGGATCTTGATATCCCCAATGTGAACTATGGAGAGGAAGTCGCTTCCGGACGAGACGCTGGTTGTGGTGGTGGTGGTACTAGGGATGGGTCAATCTCTATGATTCTCACCGATCCTGATTTTCTCGATTGCTGCATTTGCTGCGAGCCTTTGGCTATTCCTGTATTTCAGTGCAAGAATGGACATATTGCTTGCTCTACCTGCCGCACCCGACTTGACAATAAGTGTCACTTGTGCTCGGCGCCCACTGGTCACATCCGCTGCCGAGCCATCGAGAAGGTATTGGAATCTGTTAAAATATCATGCCGCAATGCAAGACATGGCTGTATAGAGAAAATTAATTACACCAACAAATGTATCCATGAGAAAGATTGCATCTACACCCCATGTTGGTGCCCTTTTGATGGTTGCCAGTTCACTGCTCCCTGCAACAAGTTATCCCAGCACATCAGCCATGATCATCATGAAGCTTTTATAAACTTTCATTATGATAGCTTCGTCTGTGTCATATTGAGGCTCAACCAGAAAGTGGTTGTTCTTCAAGAGCAGAATGACAATAATTTATTTGTTCTTACAAACGACCTGGAGCATCTAGGGAATGTGGTCAAAGTCTTTCTTGTTAGCCCCAAGTCACCATCGGGCGAGACGTATCGGTACGATCTTTACGCTAGATCAAAGGGATGCCGTCTGAAACTGAATGCTTTTGTGAACCACACTCGTGGCAACAATTTTCCTGCTACAACAAAGTTCCTTCTGGTTCCGGCTGATTTTCTCGGTCCTTCTCGACAAGTCCAGCTGGAAATTCGCATAAAGCCCGTAGTTCTTAGTGGTGGTCTACATATGTAG 1110 0.4622 MEISSGQRPSNSKNGNTSRKRPKITIRYSSRMNERHVVEYQGGRTENEDPENDAGEGTERQIEETEEEDEEEEAEDCEEYDDGDESSSGDLDIPNVNYGEEVASGRDAGCGGGGTRDGSISMILTDPDFLDCCICCEPLAIPVFQCKNGHIACSTCRTRLDNKCHLCSAPTGHIRCRAIEKVLESVKISCRNARHGCIEKINYTNKCIHEKDCIYTPCWCPFDGCQFTAPCNKLSQHISHDHHEAFINFHYDSFVCVILRLNQKVVVLQEQNDNNLFVLTNDLEHLGNVVKVFLVSPKSPSGETYRYDLYARSKGCRLKLNAFVNHTRGNNFPATTKFLLVPADFLGPSRQVQLEIRIKPVVLSGGLHM 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0165 369 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 180 238 IPR013083 -
Lele13g0165 369 Pfam Seven in absentia protein family 174 325 IPR018121 GO:0005737|GO:0006511|GO:0007275
Lele13g0165 369 MobiDBLite consensus disorder prediction 27 59 - -
Lele13g0165 369 MobiDBLite consensus disorder prediction 1 23 - -
Lele13g0165 369 ProSiteProfiles Zinc finger SIAH-type profile. 185 243 IPR013010 GO:0008270
Lele13g0165 369 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 79 359 IPR044286 -
Lele13g0165 369 SUPERFAMILY TRAF domain-like 185 346 - -
Lele13g0165 369 MobiDBLite consensus disorder prediction 60 88 - -
Lele13g0165 369 Coils Coil 55 75 - -
Lele13g0165 369 MobiDBLite consensus disorder prediction 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0165 Lele-ChrLele13 2651740 2654995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0165 128 242 C3H Transcription Factor Family AT2G41980 37.607 9.90e-21 89.7