Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0107 ATGAATTTAAGAAATTGCAAATTTCTACAACAGATACCAGACTTATCTGGAGCTTCTAATTTAAGACAATTGTGGCTTGATGGTTGCACAAATTTAATTGAAATTCATGATTCAGTTGGATGCTTAAATAAATTGAGAGAATTGAGTGCTATGTGGTGCAAAAACTTGAAGATTTTGCCGTCTTACCTTAGGTTGACATCTCTTAAACATCTCAATCTCTTCGGTTGTTCAAGTCTTGAGAGATTTCCAGAAATACCAATCATGATGGAAGCAATGCAAACACTTGATTTAGACAGAACAGCAATTACTGAGTTGCCCTCATCAATTTGCAATCTTATTGGACTTGAAATGTTAAACATGGAGGAATGTCGTAATCTCACGCAGCTACCAGCTAGCATTTGTAAATTACCGAATCTTTGGAAAATAACGGCAGATTATTGTGAAGGAATGAGTCATTTTAACATGTGCGATGGTGGTGGGGATGAAGCAAGCTTAGATTGCTCAGCAATAATGTCATTAAAAATGACACATCTTTATTTCTCAAATTGCAATTTATCATATGACTCTCTTTCTTTCTGTCTTCCTCACTTCCCTAATATGGTACATTTAGACCTAAGTTGCAATAATTTCACAGTTCTTCCAAAATGCATAAAAGAATATCACAATTTGAAATTTCTTTTGCTGGATAATTGTAAGAAACTTCAGCATATTGGAGGGATGCCACCAAACTTGGAAAAATTTAGTGCCATATGTTGCACATCATTGACTAAGTTATCCAAAAGCAAAGTATTGAAGCAGGTATTCAACTTTCAGTTTGGGAAAAGAAACTTCATTTTGCCTGAGAAAAAATTTCCAGAAAGGCTTCATTATTATAGTCGGGGAAGTTTTGTGTCATTTTGGGTTCGTAGCATATTGCCAACGACTTTTCTATGGATTCTTGTTAAAGATGACCAGGATTATGTCAACAAATGTAAATTCTCAGTGCACATCAATGACACCAAGCTGGATATTTCTTCTGAGTGGCTTTTGCTGTCAACAATAAAGACTGATCACATTTTTATATGTGATATGCATAGCATAATTCATAGTTCTAAACTCCCCCTTGGAAATAAGTGGAATCAAGTGAAGGTTTCCATTGAGAGCAAAACACAGGAAATCAAAGGTGAAAAAGAAATTCATTTTGGAGTTCATGTATGCAATCTACAAAATAACTTCAGAAGTATTCAATTCGTGGACCCTAGAAGATTTGTTGTTGATCACAACTTGTTGCAAAAAGAACAAGAACAACAATGCGAAGAACTCGAGGAAAACATGAATCAAGAAGATACAAGTAACGTGACTGTTCCAGCCCAAGAACTTCATATGGCTGCTTCGGCTCAGTTTCGGAGGCCTTACCTTAATTTTATAGATGATACACAAGAGCGAAGAGATAATTACCTAGCGCTGTGTGTTCCTCTTCACAAAGTAGCACTGAAAGGTGATTGGAGAGCAGCAAAGCAAATCTTAGACCAACACCCTACACTAGTTCACGCCGCCTTAACAAAGGGGTGGGCGACGGTGCTCCATGTGGCGGCCGGAGCGAACCACGTTCACTTAGTGGAGGAGCTGGTGAATATGATGGATCCACAAGACTTGGAATTGCAAGATGCGAATTACAACACAGCATTCTGCGTCGCTGCAGCAACTGGGAATGTGCAGATTGTTGAGATCATGCTGAGAAAAAATTCCAACTTGCCAACAATAAGAGGTGGTGAAGGACTAACTCCTCTTCACATGGCCGCTTTACAAGGACAAAGTGAAATGGCTTGGCATCTATACCCATTAACCGTTCATCTGGTTTTCCATGAAAATTTTGATTGGATCATACTTCTCTTCCATTGTGTCAACAATGAAATCTACGGTAAGAATATTACATACATGAACAAAACATGA 1932 0.3784 MNLRNCKFLQQIPDLSGASNLRQLWLDGCTNLIEIHDSVGCLNKLRELSAMWCKNLKILPSYLRLTSLKHLNLFGCSSLERFPEIPIMMEAMQTLDLDRTAITELPSSICNLIGLEMLNMEECRNLTQLPASICKLPNLWKITADYCEGMSHFNMCDGGGDEASLDCSAIMSLKMTHLYFSNCNLSYDSLSFCLPHFPNMVHLDLSCNNFTVLPKCIKEYHNLKFLLLDNCKKLQHIGGMPPNLEKFSAICCTSLTKLSKSKVLKQVFNFQFGKRNFILPEKKFPERLHYYSRGSFVSFWVRSILPTTFLWILVKDDQDYVNKCKFSVHINDTKLDISSEWLLLSTIKTDHIFICDMHSIIHSSKLPLGNKWNQVKVSIESKTQEIKGEKEIHFGVHVCNLQNNFRSIQFVDPRRFVVDHNLLQKEQEQQCEELEENMNQEDTSNVTVPAQELHMAASAQFRRPYLNFIDDTQERRDNYLALCVPLHKVALKGDWRAAKQILDQHPTLVHAALTKGWATVLHVAAGANHVHLVEELVNMMDPQDLELQDANYNTAFCVAAATGNVQIVEIMLRKNSNLPTIRGGEGLTPLHMAALQGQSEMAWHLYPLTVHLVFHENFDWIILLFHCVNNEIYGKNITYMNKT 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0107 643 Coils Coil 417 444 - -
Lele13g0107 643 SUPERFAMILY Ankyrin repeat 485 630 IPR036770 -
Lele13g0107 643 Gene3D Ribonuclease Inhibitor 1 89 IPR032675 -
Lele13g0107 643 Gene3D Ribonuclease Inhibitor 90 271 IPR032675 -
Lele13g0107 643 SUPERFAMILY L domain-like 2 268 - -
Lele13g0107 643 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 92 319 - -
Lele13g0107 643 Gene3D - 374 607 IPR036770 -
Lele13g0107 643 SMART ANK_2a 585 614 IPR002110 GO:0005515
Lele13g0107 643 SMART ANK_2a 551 580 IPR002110 GO:0005515
Lele13g0107 643 SMART ANK_2a 481 511 IPR002110 GO:0005515
Lele13g0107 643 SMART ANK_2a 516 547 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0107 Lele-ChrLele13 1750148 1756944 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0107 1 153 WRKY Transcription Factor Family AT4G12020 40.523 5.13e-18 87.0