Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0096 ATGTTGTTAGGTCATAACAGAACGCTTCTGAATGCGGCTATAGCGAAAGGATACCCAACAGTGCTCCATGTAGCAGCAGGAGCAGGCCATTTTCACTTTGTGAAGGAACTTGTAAACATGATGGATGAGAGTGACTTGGATTTACAAGACTCTATGGGAAACACTGCCTTCTGCTTTGCTGCAGCAGCAGGAAACTTGGATATTGTAAAGTTAATGTGGGAAAAAAATCCATTCTTGCCAAAAATTAGAGGTGGGAATGGTTTCACTCCCTTCTTTTTGCTGCACAACAAGGAAGAGCTGACGTGGCAAGGTATCTATATTCTAAGACTATTGGAACTTTTGATGAAGCAGATTGGAATGAGCTTTTCCTAA 372 0.4167 MLLGHNRTLLNAAIAKGYPTVLHVAAGAGHFHFVKELVNMMDESDLDLQDSMGNTAFCFAAAAGNLDIVKLMWEKNPFLPKIRGGNGFTPFFLLHNKEELTWQGIYILRLLELLMKQIGMSFS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0096 123 SUPERFAMILY Ankyrin repeat 10 104 IPR036770 -
Lele13g0096 123 PANTHER NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED 15 91 - -
Lele13g0096 123 SMART ANK_2a 52 81 IPR002110 GO:0005515
Lele13g0096 123 SMART ANK_2a 17 48 IPR002110 GO:0005515
Lele13g0096 123 Pfam Ankyrin repeats (3 copies) 19 75 IPR002110 GO:0005515
Lele13g0096 123 Gene3D - 3 102 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0096 Lele-ChrLele13 1471148 1471519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0096 20 83 MAP Kinase Kinase Kinase AT2G43850 37.500 1.90e-06 43.5