Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0071 ATGGCATTCCTCTTCAGAAAACCTCAATTTTCTGAGAAGCTAAAACTTTGGTGGCTACTGTTCGTTTGCTACTTAACGTTGTCCCCATTTCCTGTTTCCTCTATTTTCACGACTCCACCAAACCGTGAAGGAAATGCTTTGCTAAAGTGGAAAGCCAGCCTTGACAACCAAAGCCAAACTTTGTTATCATCGTGGAAAGATAAAAGCAATGATCCTTGCAAATGGGTTGGAATTGCATGCAATGAGTTCAACTCCATTTCCACCATATCTCTTCCAGATTTTGGATTAAGAGGTACGCTTGATAATCTCAATTTCTCATCTTTCTTCAATCTCCAATTCTTAGAACTTGGAGAACTTGCTTATACAATGGAGGTGACGGAGAAATGTGACGTTTATAGCTTTGGATTGTTGGCTTTGGAAATAATTATGGGACAGCATCCAAGAGATCTCATAATGTCCTATTTCTCATCATCGACATCTTCTGCCGTAGCACCAACAACGGTTGCTCATGATTTGGATATGAAGGAAGTGTTAGACCAAAGGCTACCTTATCCTCGAGGCTCGGTAGCCGAGAAGGTGATGTTGATTGCAAGAATAGCTTTTACTTGCTTGAATGAAAATCCACGAACTCGCCCGACCATGGATCAAGTATGTAAGGAGCTTGACATGCCAAGATTGCCTGCGTTTGGTTCCATTCCATAG 702 0.416 MAFLFRKPQFSEKLKLWWLLFVCYLTLSPFPVSSIFTTPPNREGNALLKWKASLDNQSQTLLSSWKDKSNDPCKWVGIACNEFNSISTISLPDFGLRGTLDNLNFSSFFNLQFLELGELAYTMEVTEKCDVYSFGLLALEIIMGQHPRDLIMSYFSSSTSSAVAPTTVAHDLDMKEVLDQRLPYPRGSVAEKVMLIARIAFTCLNENPRTRPTMDQVCKELDMPRLPAFGSIP 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0071 233 SUPERFAMILY Protein kinase-like (PK-like) 91 221 IPR011009 -
Lele13g0071 233 Pfam Leucine rich repeat N-terminal domain 40 81 IPR013210 -
Lele13g0071 233 Pfam Protein tyrosine and serine/threonine kinase 89 221 IPR001245 GO:0004672|GO:0006468
Lele13g0071 233 Gene3D Transferase(Phosphotransferase) domain 1 83 225 - -
Lele13g0071 233 PANTHER LEUCINE RICH REPEAT KINASE 2 117 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0071 Lele-ChrLele13 886488 889470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0071 91 225 Receptor kinase-like Gene Family AT1G62950 30.282 2.75e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g0071 PK_Tyr_Ser-Thr 8.3e-07 CL0016