Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0070 ATGATAAGAGAAACAAGCTTGGATAAGATACTAAGCGATGAGACACAAGCAGTTGCATTGGATTGGAGTAAAAGAATCAAAGTTGTTGAAGAACTTGCTTATACAATGGAGGCGACGGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATGTCCTATTTCTCATCATCGACATCTGCTGTAGCACCAACAACAGCTGCCCATGATTTGGATATGAAGGAAGTGTTAGACCAAAGGCTACCTTATCCTCGAGGCTCGGTGGCCGAGAAGGTGATGTTGATTGCAAGAATAGCTTTTACTTGCTTGAATGAAAATCCACGTAGTCGCCCAACCATGTATCAAGTATGTAAGGAGCTTTCCATTCCGTAG 411 0.4161 MIRETSLDKILSDETQAVALDWSKRIKVVEELAYTMEATEKCDVYSFGVLALEIIMGKHPRDLIMSYFSSSTSAVAPTTAAHDLDMKEVLDQRLPYPRGSVAEKVMLIARIAFTCLNENPRSRPTMYQVCKELSIP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0070 136 PANTHER LEUCINE RICH REPEAT KINASE 2 31 134 - -
Lele13g0070 136 Gene3D Transferase(Phosphotransferase) domain 1 30 135 - -
Lele13g0070 136 SUPERFAMILY Protein kinase-like (PK-like) 31 133 IPR011009 -
Lele13g0070 136 Pfam Protein tyrosine and serine/threonine kinase 30 133 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0070 Lele-ChrLele13 866342 867511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0070 28 136 Receptor kinase-like Gene Family AT1G75820 35.043 1.27e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g0070 PK_Tyr_Ser-Thr 4.9e-08 CL0016