Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0065 ATGATGAGTGAGAGTGGTGAGAAACCTGCATGGCTAGAGAGGCTCATGGCGGAGACATTCTTTGGTGGGTGTGGGGTCCACCAGAATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCTCACTGTGTCCCTTCCCATCCATCTCATCCTCTTCTCCAGGTGAGAAGGTATGTGTACCACGACGTCGTTCGACTGGGTGATCTGGGAAAGCTCATTGATTGTTCCAATATTCAGGCATATACGATAAACGGAGCGAAGGTGATATTCATAAAGCAGAGGCCACAGTCACGGCCATGCAAAGGCTCAGCCAATGCTTGCTGTACCTGCGATCGCATTCTTCAGGACCCCTTCCTCTTCTGTTCTCTCTCTTGCAAGGTAGATCACATGGTGGAGGAAGGGGAGGACCTATCCGGCATCTTGCATCAATTCTGCGATTCCGACTTCGCCTTCTCCCACTTCGACGCCACCTCGTCCGACCAGGATTCCCAGATTGCTCCTCCCTCCTCCTACGGCTCGTCTGGCAATTCCGTCATTTCACCTCTACGCCTCCCCCGCCTCGTCCTCTCCCTGGGCGGCAGAAGGAAGGGCGCCCCTCAACGAGCCCCTCTCTCCTAA 639 0.543 MMSESGEKPAWLERLMAETFFGGCGVHQNRRKNEKNVFCLHCCLSICPHCVPSHPSHPLLQVRRYVYHDVVRLGDLGKLIDCSNIQAYTINGAKVIFIKQRPQSRPCKGSANACCTCDRILQDPFLFCSLSCKVDHMVEEGEDLSGILHQFCDSDFAFSHFDATSSDQDSQIAPPSSYGSSGNSVISPLRLPRLVLSLGGRRKGAPQRAPLS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0065 212 Pfam PLATZ transcription factor 63 134 IPR006734 -
Lele13g0065 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0065 Lele-ChrLele13 795403 799888 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele13g0065 PLATZ 4.3e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0065 13 795403 799888 Lele13g0065 13 795403 799888 ECH
Lele13g0065 13 795403 799888 Lele15g2378 15 27964201 27968690 hybridization
Lele13g0065 13 795403 799888 Lele16g2335 16 23621014 23625092 hybridization