Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0063 ATGGTGAAGGAACGCCAAGGAGAGCGCATCAGACTCTATGTGAGAGGCACAGTCCTTGGATACAAGAGGTCGAAGTCGAACCAGTACCCTAACACATCTCTGATCCAAATTGAGGGAGTGAACACCAAAGAAGAGGTAGCATGGTATTGTGGCAAGAGAATGGCATATATCTATAAGGCCAAGGTTAAGAAGAATGGGACTCATTATCGCTGCATCTGGGGTAAAGTGACCAGGCCACATGGTAACAGTGGTGTTGTAAGAGCCAAATTCAAGTCAAACTTGCCACCCAAATCAATGGGAGCTAGGGTAAGAGTATTCATGTATCCAAGCAATATATGA 339 0.4513 MVKERQGERIRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAKVKKNGTHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0063 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele13g0063 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Lele13g0063 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele13g0063 112 Gene3D translation elongation factor selb, chain A, domain 4 7 112 IPR038661 -
Lele13g0063 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Lele13g0063 112 FunFam 60S ribosomal protein L35a 7 112 - -
Lele13g0063 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0063 Lele-ChrLele13 741126 742628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0063 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 90.179 7.95e-74 213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0063 13 741126 742628 Lele15g2380 15 28025937 28027445 hybridization
Lele13g0063 13 741126 742628 Lele16g2339 16 23691481 23692968 hybridization