Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0061 ATGGTCTTTGCAGCAGCCTTTATGCATGAAGATGGCCATTTTTCTTTCTCCAAGAAGAGGCTGAGAGTATCAGATTTTGGACATCAAGATCTAAATCCACATGCATATGCAGGATGTTTCAGTGATGCGCCGTTGCCTTCACATTGGATGCAGAAAGGTCCTAATTTTACGTCTCTATCTTTTCTTTTGGATACTGGTGATATTCCCTCTTGTTCCAGTCTTGATGATAGAGTTGATTCAGATTCTGGATTGGATATGAGCTACCAGTCAAATATTAAAAGCGTTGATATTCCTCTATGCTTTACAACAGGAAATATTTCATTCCAGGATCAGAGTCATCCTGGCTATATGCAGCCTGCTTTTGTGAGTGGATGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATGTTCAGGAGCAACTATACGAAGGATTAACTACTGGCTTCTTGCCAGTTGAGCTTCCTGTTTATCCTATGATCAATGGAACGTTAATGAACGCTGTACCATTGAATTACTTCAAGCAGTTTCCTGACCATGTTTCCACAGGGTTTGTATATCTGAGCATGGACTGCTCAGTCATAACCATGCCTACAGGTTGCTCCACATCATCTGGTAAGGATATGACATCATTTAGACAAGGATCCTTTGAGCATGCTCCTCCTGTAGCTGTCAACCTTGATTCACAGTCAGTTTCCCTGTCACATGGCAACAACACCAGTAAGGCATTCTTGACATCGAACTCAAAGTTACATGAAGAATGCTGTTGGCTTTATGAGGATGAAAAGGGAATGAAGCATGGACCACATTCCATGTTGGAATTAATTTCCTGGCATCATTATCGACATCTCCGAGATTCATCAGTGGATAGCATTGATTCTCCATTTGATGTAAAGGTTTTGGTGGTTTCTATAACATCTCCATTTGATGTAAAGATTCATCATACTGAAAATAAGTGTAGCCCCTTTGTCCTTTTGTCTGCTATAAATGCATGGAAAACAGGAAAGCTTGAAAACATCTGTAGATCAGATTCCAAAAGTGACAGGGCTTGTAGTGATACCAGAAGCTTCATCTATGAAATATCTGAGGACATTTCTTCTCAGCTGCATTTGGGAGTCATGAAAACAGCCCGCAGGGTGGTGTTGGATGAGATTATCAGTAACACCATTGCAGAATTTGTTACTGAAAAGAAATCTCGGAGGCATAAGCATGACTCAGTTGATCAGCCTACTGAGACTAGCTTGTTAGGCTGCAGAATGACTGAGGCTGCTGTGGAGATGAGAAAAGGTACTGTTCTTACAAGTGAGCCAACATCTTCCCAAATGCTTGATGATCAGTCTTCTTGTGAAGTTTCCAGGGTGTCTCCAACAAGCGCTAAATCAGTTGGAAGTATTGAAAACTTTTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTTGTGATTATTGCATGGAAGTCATGTGGAATGCTGCGGTTTATGATTCTATGGCGGAGTACATACATAACTGGAGAAAGAGAAAACTTTGGTCTATTGGTCCTAATCCTCAGCCATCTATTAATGGATGTAAAGATTATGGTGGAATGATTACATCAGGAGAAGCTTTGCTTCCCAGGCCAGGTTCCTCTGCACATGATGCTGTTCGGCATCCTCATTGTGAAGGGGTGGCAATGGAGAGAGACTATCTTAGCCTATCGTCTTCTATGTCTTCTCTTGTCTTGAAAGAAGGAAACATTTCAGAAAATGGAAGAGTGTCATGTTCTGATCGTGATTGTATAGATTTGATATGCATTCTTGAAAGTGTGGAGAATGAGCTTCACACGATGTCTGTGGCATCTTTAACTGAATACATTAAAAGTTTAGTTGACAAGGAAGTGAAAAGATTATTTAATTGTCCTGAAGAAGACAACTTGAGCAAGGATGCTTTCAGCAAGGACATTTTTCCAGAGATATCTTGTGACAAAACATCTGAAGAGGGGATTTTATCTGACAAGAAGGTTTCTATGAAAAAAGGAAATAGTCTTGAAAATTCCATATCTGGAAACCATATGACTACTTTATTCTCAAGTGCATTTCATGAGTTGCATGCCAATGTAGGTGATGTGGTTAATGAAAAGGAGATCGGTGACATATCACCTCCTGGATGTGAAAAGAATTCAAAAACTATTGTACCACAATACAATTATAAGTATCGACCTTCAAGATTAGTTGAAAGTGTTCCTAAGATAACAAAATATGTTACAACAGCGCTATGCCGACAGAAGTTGTATTCTGAGGTTCTTGACGACTGGAAATCTTTGTTTCTTTATGCTGCATTCAATCAAGTTTTTGCATCATTCTGCACTACAAAGAAAGTCAGCCAGCCTGATGGTTACATGGAAGGGAAAGTATTGTATTCATCTGAGGAACATTTGAGTGATCCAACTCTGGGAGGGATGAAGAAAATACCCAAGAATTCTTCATCAGAAGATTCCCGGATGGTTGGGAAATATACATATCATCGCAAGAAGTTACCACAGAAGGAGCGAGGTTCTTCTCAACTCATAGCTGTGCCTGTCAAAAAACAAGTGGATAAGCAGAAGAAACATGTGGATAATAGGAAGAAACGTGTTTCTGGGGATTTGGATGAGTCTGCCAAAGTTGGAATATCTCCTGATAAAACTGTGCAGACTAAGCTGATAAAAGGGAAGGATAAACAGGCTAATGGAAAGTCTCTTGCTGTCAGTGCTAAAAGAAACTTGCAGAGTAAGAAGTCCTCTATAAATAATGTGACTAGTAAAAAATTATTGAAGCATTCACAGGCAGTCCAAGATGATGTCAAGGATGATGATAAAAGTAATGTACAGAAGATTTTAACCGTTGTAGAAAATAGTGTTGGCAAGAAGTTAGTTGATAGAAATGGTCGTGATGGTTCCATACATGGAAAGTCCACGCGTTACTGCTCCAGGGAAACTCTTAAGTGTAGGACCTCTATTGATGGGTGGGAATGGCATGAATGGTCTGTGAATGCCAGTTCTGCTGATAGAGCATGTGTTAGGGGAGCAGTGTATGTTCAAAAGAACTGTATACAATCTGATAGTAACCCAACTCATTGGTCAAATTGTAAGGGTCTTTCTGCACGGACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAGTTGAAGGCGAGGAAAAAACGTTTATGTTTTCAAAGAAGTAAAATACATGACTGGGGTATTGTTGCCTTGGAGTCAATAGAGGCAGAGGACTTCGTGATTGAATATATTGGAGAACTAGTCCGGCCTCGGGTCGATGCTACGAAAAGAGGTGGGATTGCAAGATTTATAAATCATTCTTGTGAGCCTAATTGCTATACCAAGGTCATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGTCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAATTTCCTTTGGAGGAGAATAAGATTCCCTGCAACTGTGGCTCCAAAAAGTGTCGTGGATCACTGAATTAG 3549 0.3998 MVFAAAFMHEDGHFSFSKKRLRVSDFGHQDLNPHAYAGCFSDAPLPSHWMQKGPNFTSLSFLLDTGDIPSCSSLDDRVDSDSGLDMSYQSNIKSVDIPLCFTTGNISFQDQSHPGYMQPAFVSGWMYVNENGQMCGPYVQEQLYEGLTTGFLPVELPVYPMINGTLMNAVPLNYFKQFPDHVSTGFVYLSMDCSVITMPTGCSTSSGKDMTSFRQGSFEHAPPVAVNLDSQSVSLSHGNNTSKAFLTSNSKLHEECCWLYEDEKGMKHGPHSMLELISWHHYRHLRDSSVDSIDSPFDVKVLVVSITSPFDVKIHHTENKCSPFVLLSAINAWKTGKLENICRSDSKSDRACSDTRSFIYEISEDISSQLHLGVMKTARRVVLDEIISNTIAEFVTEKKSRRHKHDSVDQPTETSLLGCRMTEAAVEMRKGTVLTSEPTSSQMLDDQSSCEVSRVSPTSAKSVGSIENFWWSYAVVRKVLCDYCMEVMWNAAVYDSMAEYIHNWRKRKLWSIGPNPQPSINGCKDYGGMITSGEALLPRPGSSAHDAVRHPHCEGVAMERDYLSLSSSMSSLVLKEGNISENGRVSCSDRDCIDLICILESVENELHTMSVASLTEYIKSLVDKEVKRLFNCPEEDNLSKDAFSKDIFPEISCDKTSEEGILSDKKVSMKKGNSLENSISGNHMTTLFSSAFHELHANVGDVVNEKEIGDISPPGCEKNSKTIVPQYNYKYRPSRLVESVPKITKYVTTALCRQKLYSEVLDDWKSLFLYAAFNQVFASFCTTKKVSQPDGYMEGKVLYSSEEHLSDPTLGGMKKIPKNSSSEDSRMVGKYTYHRKKLPQKERGSSQLIAVPVKKQVDKQKKHVDNRKKRVSGDLDESAKVGISPDKTVQTKLIKGKDKQANGKSLAVSAKRNLQSKKSSINNVTSKKLLKHSQAVQDDVKDDDKSNVQKILTVVENSVGKKLVDRNGRDGSIHGKSTRYCSRETLKCRTSIDGWEWHEWSVNASSADRACVRGAVYVQKNCIQSDSNPTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKRLCFQRSKIHDWGIVALESIEAEDFVIEYIGELVRPRVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKKCRGSLN 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0061 1182 Gene3D SET domain 1017 1107 IPR046341 -
Lele13g0061 1182 SMART set_7 1070 1166 IPR001214 GO:0005515
Lele13g0061 1182 SUPERFAMILY GYF domain 253 288 IPR035445 -
Lele13g0061 1182 SMART PostSET_3 1166 1182 IPR003616 -
Lele13g0061 1182 Gene3D SET domain 1108 1182 IPR046341 -
Lele13g0061 1182 ProSiteProfiles Post-SET domain profile. 1166 1182 IPR003616 -
Lele13g0061 1182 Pfam SET domain 1110 1159 IPR001214 GO:0005515
Lele13g0061 1182 Gene3D - 242 297 IPR035445 -
Lele13g0061 1182 SUPERFAMILY SET domain 1065 1179 IPR046341 -
Lele13g0061 1182 MobiDBLite consensus disorder prediction 808 879 - -
Lele13g0061 1182 ProSiteProfiles SET domain profile. 1070 1160 IPR001214 GO:0005515
Lele13g0061 1182 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 16 934 IPR044570 GO:0042800|GO:0051568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0061 Lele-ChrLele13 714963 723981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0061 1076 1182 C2H2 Transcription Factor Family AT2G23740 33.333 1.30e-13 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele13g0061 SET 6.7e-15 No_clan