Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0058 ATGCTTTGGTTTGGGATTTGTGTTGCTAGCAATAGTTTCAATAGGAATATCATATATTAAGGGGGAAGCTTGGATAAGATACTAAGCAATGAGACACAAGCAGTTGCATTGGACTGGAGTAAAAGAATCAAAGTTGTTGAAGACTCAGATTATGAGGCTCACATCTCTGACTTCGGGACAGCCAAGCTTTTGTACCCAAATTCTAGCAATTGGACCTCATTTGCTGGCACCTTTGGCTATGCTGCTCCAGAACTTGCTTATACAATGGAAGTGACCGAGAAATGTGACGTTTACAGCTTTGGAGTGTTAGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATGTCCTATTTCTCATCAACATCTTCTTCTGCAACACCAACAATAGTTGCTCATGGTTTGGATTTGAACGAAGTGTTAGACCAAAGACTACCTTATCCTCAAGGCTCAATGGCTAAGAAGGTGATGTTGATTGCAAGAATAGCTTTTAATTGCTTGATTGAAAATCCAAGTACTCGCCCAACCATGGAGCAAGTATGCAAGGAGCTTGGCATGCCAAGATCACATATTTTTGGATCCATTCCATAG 597 0.4037 MLWFGICVASNSFNRNIIYXGGSLDKILSNETQAVALDWSKRIKVVEDSDYEAHISDFGTAKLLYPNSSNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALEIIMGKHPRDLIMSYFSSTSSSATPTIVAHGLDLNEVLDQRLPYPQGSMAKKVMLIARIAFNCLIENPSTRPTMEQVCKELGMPRSHIFGSIP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0058 198 Gene3D Transferase(Phosphotransferase) domain 1 43 193 - -
Lele13g0058 198 Pfam Protein kinase domain 49 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0058 198 SUPERFAMILY Protein kinase-like (PK-like) 20 186 IPR011009 -
Lele13g0058 198 PANTHER LEUCINE RICH REPEAT KINASE 2 21 190 - -
Lele13g0058 198 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0058 198 SMART serkin_6 4 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0058 Lele-ChrLele13 656007 657199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0058 41 189 Receptor kinase-like Gene Family AT1G75820 38.365 1.73e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g0058 Pkinase 1.6e-14 CL0016