Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0057 ATGGAGGTGACGGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGACAGCATCCAAGAGATCTCATAATGTCCTCTTTCTCATCATCGACATCTTCTTCTGTAGCACCAACAACAGCTGTTCATGATTTGGATATGAAGGAAGTGTTAGACCAAAGACTACCTTATCCTCGAGGCTCGGTGGCCGAGAAGGTGATGTTGATTGCAAGACTAGCTTTTACTTGCTTGAATGAAAATCCACGTACTCACCCAACCATGGATCAAGTATGTAAGGAGCTTGCCATGCCAAGATCGCCTGTTTTTGGTTCCATTCCGTAG 336 0.4375 MEVTEKCDVYSFGVLALEIIMGQHPRDLIMSSFSSSTSSSVAPTTAVHDLDMKEVLDQRLPYPRGSVAEKVMLIARLAFTCLNENPRTHPTMDQVCKELAMPRSPVFGSIP 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0057 111 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Lele13g0057 111 PANTHER LEUCINE RICH REPEAT KINASE 2 1 103 - -
Lele13g0057 111 Pfam Protein tyrosine and serine/threonine kinase 2 99 IPR001245 GO:0004672|GO:0006468
Lele13g0057 111 SUPERFAMILY Protein kinase-like (PK-like) 3 100 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0057 Lele-ChrLele13 633299 633634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0057 3 99 Receptor kinase-like Gene Family AT1G25390 34.694 4.26e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g0057 PK_Tyr_Ser-Thr 7.6e-06 CL0016