Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0056 ATGGAGGTGACGGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGTTTTGGAAATAATTATGGGACAGCATCCAAGAGACCTCATAATGTCCTCTTTCTCATCATTGACATCTTCTGCTGTAACACCAACAACAGCTGCTCATGATTTGGATATGAAGGAAGTGTTAGACCAAAGGCTACCTTATCCTCGAGGCTCGGTGGCCGAGAAGGTGATGTTGATTGCAAGAATAGCTTTTACTTGCTTGAATGAAAATCCACGTACACGCCCAACCATGGATCAGTATGTAAGGAGCTTGCCATGCCAAGATCGCCTGTTTTTGGTTCCATTCAGTAGCATCGCAACTGAATAA 351 0.4359 MEVTEKCDVYSFGVLVLEIIMGQHPRDLIMSSFSSLTSSAVTPTTAAHDLDMKEVLDQRLPYPRGSVAEKVMLIARIAFTCLNENPRTRPTMDQYVRSLPCQDRLFLVPFSSIATE 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0056 116 SUPERFAMILY Protein kinase-like (PK-like) 3 103 IPR011009 -
Lele13g0056 116 Pfam Protein tyrosine and serine/threonine kinase 2 99 IPR001245 GO:0004672|GO:0006468
Lele13g0056 116 Gene3D Transferase(Phosphotransferase) domain 1 1 100 - -
Lele13g0056 116 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0056 116 PANTHER LEUCINE RICH REPEAT KINASE 2 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0056 Lele-ChrLele13 618256 618606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0056 2 99 Receptor kinase-like Gene Family AT5G49660 34.694 3.96e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g0056 PK_Tyr_Ser-Thr 3.2e-07 CL0016