Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0055 ATGTCGTCGCTGTCGTCTCCAATGGAACCAACAAAACCTCTAATCCCTCCTTTTCTCTTTCTCTTTTTCTTCCTCATCAATATCCATCCTTCTGCGCAGAATCCGTCACCTTCCACCCTCTCCGGCGACCCCCATCACCAAGCATTACGCAGGCTCGAAGCTATCAAAGCTTCTCACGTCAGACTCAGTGCTCCCACTTCTTCACCACCGTCACTTTCTCCGTCGTTACCTTCGCCACCACCGTCGGGTTCAAATGGTCCACGGGTATACCTTGCGACGTCGTACGGAGCGGATCCGACGGGGAAGATCGACAGTACAGACGCTCTTCTTGCAGCAATCGCCGATGCGGCGACGAATGGTCGCAGTGAAGGGTTCTTGATAGACGGCGTTGCTAATCTTGGAGGCGCACAGGTTTATCTTCAGGGCGGTAACTACTTGATCAGCCGGCCGCTCCGGCTTCCGGCCGCAGGCGTCGGAAACTTCATGATGCATGGTGGGAGCATACGAGCCTCAGATAGCTTTCCATCGGATGGATACCTCATTGATTTATCAACCACCAACGGAAATGACAAGACTGCCCCACCTTCATCCTACAATTACGAGTTCATCACCTTCAAGGACCTTCTCCTGGACTCCAACTTCCATGGAGGAGGTATCTCTGTCATCAACTCCCTCAGAATCGGCATAGACAACTGCTACATCACCCACTTCACCACCAACGGAATCCTCGTCCAAGCCGGCCACGAAACCTACATCAGAAACTCATTCATTGGCCAACACATCACCGCGGGCGGCGACAAAGGCGAAAGGAACTTCACCGGCACCGGAATCAACCTCCAGGGCAACGATAACTCCGTCACTGACGTCGTCATCTTCTCCGCCGCCATCGGAATAATGGTCTCCGGTCAGGCCAACATAATCTCCGGCGTACATTGCTATAACAAAGCCACCGGCTTCGGAGGCGCCGGGATTTATCTCAAACTTGCTGGGTTGACACAAACTAGGATCTTGAACTCTTACATGGATTACACCAGCATTGTTGCAGAAGACCCAGTGCAGCTCCATATTGCTGGTACTTTCTTCCTCGGAGATGCAAACGTTGTCCTCAAATCGGTCAAAGGAGTTATCAACGGAGTAAACATCGTTGACAATATCTTTTCTGGGAATAACAATGGGGTTGAAATCGTTCATCTGGATGAATCAAGTGGTAATAAGTTCAAGCAAGTTGATGAGGTTGTGGTGGATAGGAACGCAGTGAAGGGGATGAAGTTGAAGAGCACAGTGGCGAAGAAGACAGTGGAAGGGAATAATAATGGAACCTCATTAATGGCGGATTTTAATGATGTTTTGGTTTTCCCTAACCTTATAAAACATGTGCAGTATTCATTATTGAGCTTCGAAGGTGACACATTTCCAAGTTATGTTCTGAGGAATGTGTCTGATAATCGTGTGGTCATTCAAACAAGCGAAGCGGTGCCTGCAGCAAGTTTCTATGTTGCTGTGGATCAAAGTTTATAA 1518 0.4921 MSSLSSPMEPTKPLIPPFLFLFFFLINIHPSAQNPSPSTLSGDPHHQALRRLEAIKASHVRLSAPTSSPPSLSPSLPSPPPSGSNGPRVYLATSYGADPTGKIDSTDALLAAIADAATNGRSEGFLIDGVANLGGAQVYLQGGNYLISRPLRLPAAGVGNFMMHGGSIRASDSFPSDGYLIDLSTTNGNDKTAPPSSYNYEFITFKDLLLDSNFHGGGISVINSLRIGIDNCYITHFTTNGILVQAGHETYIRNSFIGQHITAGGDKGERNFTGTGINLQGNDNSVTDVVIFSAAIGIMVSGQANIISGVHCYNKATGFGGAGIYLKLAGLTQTRILNSYMDYTSIVAEDPVQLHIAGTFFLGDANVVLKSVKGVINGVNIVDNIFSGNNNGVEIVHLDESSGNKFKQVDEVVVDRNAVKGMKLKSTVAKKTVEGNNNGTSLMADFNDVLVFPNLIKHVQYSLLSFEGDTFPSYVLRNVSDNRVVIQTSEAVPAASFYVAVDQSL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0055 505 MobiDBLite consensus disorder prediction 63 91 - -
Lele13g0055 505 MobiDBLite consensus disorder prediction 70 84 - -
Lele13g0055 505 Pfam Pectate lyase superfamily protein 93 318 IPR024535 -
Lele13g0055 505 FunFam Polygalacturonase QRT3 92 497 - -
Lele13g0055 505 PANTHER POLYGALACTURONASE QRT3 43 504 IPR039279 GO:0004650
Lele13g0055 505 SUPERFAMILY Pectin lyase-like 88 459 IPR011050 -
Lele13g0055 505 Gene3D - 92 485 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0055 Lele-ChrLele13 607673 610539 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0055 13 607673 610539 Lele13g0055 13 607673 610539 ECH