Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0052 ATGGAGGGTTTTCACCCACTTATGACTTCGTCTTCTTCACCATTTGCTTACACTTTCAATCTCAGTGCTGGTTCTGGTGTTTCATCTTCTTCAAGCGTATACACGACTCCATGGATGGACTTTAGAATATGGAGCAAGCTTCCACAGAGAATTCTTGACAGAATCTTGGCTTTTCTTCCACCACCTGCTTTCTTCAGAGCACGTTGTGTCTGCAAGAGATTCTATGGCCTCTTATTTTCCAACACTTTTCTTCAACTTCACCTCCAAATCTCACAACCCCACCATTGGTTCATTTTCTTCAACCTCAACAAGAGCCTCAAGAGCAGCCATATCGTCTACGCTAAGAACCCTAGTTCCAGTGGTGGAAGTGGAAGCAGTGGTGGTGGTGGAACTACTACGACTACGGCTACTACTACTACACACTGTTGTGAAGCTTACCTATTTGATCCTTATGAAATCTCTTGGTACCGGGTCCCATTTCCTCTTCTTCCTTCTGGTTTCTCTCCATCTTCTTCTTCCTCAGGCTTGGTCTGTTTTGTTTCAGACGAAGCTGGTCCCAAGGCTCTTATTCTCTCCAATCCCATACTTGGTACCATAACTCAACTTCCTCCCACAATAAGACCAAGACTCTTCCCTTCCATTGGCCTAGCGATTTCCCATTCCTCCATAGATCTCACTGTTGCAGGTGACGACATGATTTCCCCTTATGCTGTGAAAAACCTAACATCCGAAAGCTTCCATATTGACTCTAGTGGGTTTTATTCCATATGGGGGACCACATCTTCTCTTCCTAGACTCTGTAGTCTGGAATCTGGGAAGATTATTCACGCAGGAGGAAGATTCTACTGCATGAACTACAGCCCTTTTAGTGTTTTATGTCACGATATTTCATCAAACACTTGGTTTAAAATCCAAGCACCGATGAGGAGATTCTTAAGGTCTCCGAGTTTGATTGAAAGCAAAGGGAAGTTACTTTTAGTTGCGGCAGTTGAAAAGAGCAAGCTTAATGTTCCGAGGAGTTTAAGGGTGTGGATTCTTCAGGCTTGTGGGACAACATGGGTGGAAACAGAGAGAATGCCTCAGCAACTTTATGTGCAATTTGCAGAATTAGAAGGAGGGAATGGTTTTGACTGTGTAGGGCATGGTGAGTTTATTGTGTTAATGATTAAAGGAACAGATAAGGCTTTGTTGTTTGATATCTGCAGAAAGAGATGGCAATGGATTCCACCATGTCCTTACGTTGTTGCTTCAAGTGCTGGTCGTTCTGCTTTGCATGGCTTTGCTTATGAGCCTTCACTTGCCACCCCAGTTACTGCCCTTCTGGATCAACTAGCACTTCCATTTTAG 1347 0.4388 MEGFHPLMTSSSSPFAYTFNLSAGSGVSSSSSVYTTPWMDFRIWSKLPQRILDRILAFLPPPAFFRARCVCKRFYGLLFSNTFLQLHLQISQPHHWFIFFNLNKSLKSSHIVYAKNPSSSGGSGSSGGGGTTTTTATTTTHCCEAYLFDPYEISWYRVPFPLLPSGFSPSSSSSGLVCFVSDEAGPKALILSNPILGTITQLPPTIRPRLFPSIGLAISHSSIDLTVAGDDMISPYAVKNLTSESFHIDSSGFYSIWGTTSSLPRLCSLESGKIIHAGGRFYCMNYSPFSVLCHDISSNTWFKIQAPMRRFLRSPSLIESKGKLLLVAAVEKSKLNVPRSLRVWILQACGTTWVETERMPQQLYVQFAELEGGNGFDCVGHGEFIVLMIKGTDKALLFDICRKRWQWIPPCPYVVASSAGRSALHGFAYEPSLATPVTALLDQLALPF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0052 448 SUPERFAMILY F-box domain 37 101 IPR036047 GO:0005515
Lele13g0052 448 FunFam protein UNUSUAL FLORAL ORGANS 40 84 - -
Lele13g0052 448 Pfam F-box domain 44 75 IPR001810 GO:0005515
Lele13g0052 448 ProSiteProfiles F-box domain profile. 41 86 IPR001810 GO:0005515
Lele13g0052 448 SMART fbox_2 47 87 IPR001810 GO:0005515
Lele13g0052 448 SUPERFAMILY Galactose oxidase, central domain 145 414 IPR011043 -
Lele13g0052 448 PANTHER BNACNNG10540D PROTEIN 29 435 - -
Lele13g0052 448 Gene3D - 42 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0052 Lele-ChrLele13 583261 584607 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0052 13 583261 584607 Lele13g0052 13 583261 584607 ECH
Lele13g0052 13 583261 584607 Lele15g2391 15 28174732 28176090 hybridization
Lele13g0052 13 583261 584607 Lele16g2348 16 23872156 23873514 hybridization