Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0048 ATGGCTTCTTCGTTGCCTATTTCTCAGCCTACTAGTTACAGCGTCTTCTCTAAAAACCAGTTGAGAGGATTTGGCCATGGCTCCCGGCGACCCAGCTTCTCATTTTGCCGCGACTCCGAAAGCAAAGTTCGACCCACCAGAGCTTCGGTAGATACAGCCCCATTCCCGTTGTTCCAACCTCCCAAAGTTGAAGAATCATCGTCTGAGTTGGAGCCTGCAGACCCAGATTTCTACAAGATAGGTTATGTTCGAAGCATGCGAGCTTATGGAGTTGAGTTTAAGGAAGGGCCAGATGGGTTTGGTGTGTATGCTTCTAAAGATGTAGAACCTCTTCGCCGAGCCAGGGTTATTATGGAAATTCCTCTTGAATTGATGTTAACCGTGAGTCATAAGCCCCCATGGATGTTCTTCCCTGATATAATTCCAGTGGGACATCCAATATTTGATATCATCAACTCAACAAATCCTGAGACAGAGTGGCACCTAAGATTAGCATGCCTGCTGTTATATGCACTGGACTGTCAGGAAAACTTTTGGCAGTTGTATGGTGACTTCTTACCCAGTGCTGATGAATGCACTAGCCTACTTCTGGCAACGGAGGAGGAACTTTTGGAGCTGCAGGATCCAAATCTTGCTTCTACCATCAAGCACCAGCAACGTCATGCCTTGGAATTCTGGGAGAAGAATTGGCACAATGGTGTTCCCCTTAAAATAAGGCGTCTTGCTTGTGATCCTCAAAGGTTCATGTGGGCAGTAGGTATGGCACAATCACGATGCATTAACCTGCAAATGAGGCTTGGCGCACTACATAAAGATGCAAATATGCTGATTCCTTATGCTGACATGCTGAACCATTCATTTGAGCCAAATTGCTTTTTTCATTGGCGTGTCAAGGACCGGATGCTTGAGGTGCTTATAAATGCTGGACAGAGGATTAGAAAGGGAGATGAGATGACGGTTGATTACATGAGCAGACAAAAGAATGACATGTTTATGCAAAGATATGGCTTCTCATCATCTGTGAATCCTTGGGATGAGATCAAATTCTCTGGAGATGCACGTATACATTTGGATTCCTTCTTGTCAGTGTTCAACATATCTGGCCTGCCTGAAGAGTATTATCATAACACTCTACTATCTAACGAGGGCAATACTTTTGTTGACGGAGCAGTCATAGCCGCAGCACGAACGCTGCCAACTTGGTCAGATGGAGATGTACCTCCAATCCCTAGTGTGGAACGGAAGGCTGTTAAGGAGTTACAAAATGAATGCCAACAAATGCTTGCAGAATTCCCCACAACCTCCAAGCAAGACCAAAAATTGCTAGATTCATTGCAAGATGGTACCAGGACTCTTGAAGCTGCAATGAAGTACAGATTGCACAGGAAATTGTTCATAGAGAAAGTGATCCAAGCATTAGACATCTATCAAGAGAGATTAATCTTCTGA 1449 0.4458 MASSLPISQPTSYSVFSKNQLRGFGHGSRRPSFSFCRDSESKVRPTRASVDTAPFPLFQPPKVEESSSELEPADPDFYKIGYVRSMRAYGVEFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTVSHKPPWMFFPDIIPVGHPIFDIINSTNPETEWHLRLACLLLYALDCQENFWQLYGDFLPSADECTSLLLATEEELLELQDPNLASTIKHQQRHALEFWEKNWHNGVPLKIRRLACDPQRFMWAVGMAQSRCINLQMRLGALHKDANMLIPYADMLNHSFEPNCFFHWRVKDRMLEVLINAGQRIRKGDEMTVDYMSRQKNDMFMQRYGFSSSVNPWDEIKFSGDARIHLDSFLSVFNISGLPEEYYHNTLLSNEGNTFVDGAVIAAARTLPTWSDGDVPPIPSVERKAVKELQNECQQMLAEFPTTSKQDQKLLDSLQDGTRTLEAAMKYRLHRKLFIEKVIQALDIYQERLIF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0048 482 MobiDBLite consensus disorder prediction 21 48 - -
Lele13g0048 482 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 67 450 - -
Lele13g0048 482 Pfam SET domain 99 322 IPR001214 GO:0005515
Lele13g0048 482 SUPERFAMILY SET domain 98 337 IPR046341 -
Lele13g0048 482 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 334 478 IPR036464 -
Lele13g0048 482 Pfam Rubisco LSMT substrate-binding 412 463 IPR015353 -
Lele13g0048 482 CDD SET_LSMT 90 337 - -
Lele13g0048 482 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 83 337 - -
Lele13g0048 482 ProSiteProfiles SET domain profile. 78 323 IPR001214 GO:0005515
Lele13g0048 482 Gene3D set domain protein methyltransferase, domain 1 83 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0048 Lele-ChrLele13 533258 545538 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele13g0048 SET 6.4e-20 No_clan