Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0043 ATGATTACGTTGCATTATTCTTCATCTCCTTTCTCTACTTACTGCTTACACACCAAACCCAAATTCAGTAGTAATCGCTTCATCTCTCAAATTCGAAGCAATGATTCTCCAACTAAATTATCCAATTTCGTCCCATTCCTAGTCAAGCAAACCCCAGACGACGCCAACAACAACAACTACTTCTTGAAGCGAAGAGAAGCAATAGGGCTTGCCTTTGGATTCGGCCTTTGCAATGTTGTGCTTCATTCTCTGCCGGAAGCCACGTCAGCAGCCGAATCAGCGGCAGCTCCATGCGAACTAACAGTGGCTGCTTCAGGCATCGCCTTCTGTGATAAACTTGTGGGAAATGGCCCTCAAGCTGAAAAGGGACAGCTCATTAAGGCACATTATGTTGGGAAATTGGAGAATGGGAAAATTTTCGACCGAAGCTATAATCGTGGCAAGCCTCTTACGTTTCGTGTTGGCGTTGGGGAGGTGATCAAAGGATGGGGTGAAGGAATATTAGGAGGTGATGGAATACCTCCCATGCTTGCAGGAGGCAAACGAACATTGAAAATTCCTCCACAACTTGCGTACGGCTCAAGAGGTGCTGGCTGTAGAGGAGGTTCATGTATCATCCCTCCTGATTCGGTCCTTTTATTTGAGGTGGAGTTCATTAGCAAGGCTTGA 669 0.4619 MITLHYSSSPFSTYCLHTKPKFSSNRFISQIRSNDSPTKLSNFVPFLVKQTPDDANNNNYFLKRREAIGLAFGFGLCNVVLHSLPEATSAAESAAAPCELTVAASGIAFCDKLVGNGPQAEKGQLIKAHYVGKLENGKIFDRSYNRGKPLTFRVGVGEVIKGWGEGILGGDGIPPMLAGGKRTLKIPPQLAYGSRGAGCRGGSCIIPPDSVLLFEVEFISKA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0043 222 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 123 222 IPR001179 GO:0003755
Lele13g0043 222 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 35 220 IPR044183 GO:0009507
Lele13g0043 222 SUPERFAMILY FKBP-like 100 220 - -
Lele13g0043 222 Gene3D - 94 222 IPR046357 GO:0003755
Lele13g0043 222 FunFam Peptidylprolyl isomerase 95 221 - -
Lele13g0043 222 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 118 219 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0043 Lele-ChrLele13 479739 482626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0043 121 220 Calmodulin-binding Proteins AT5G48570 41.000 1.84e-15 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0043 13 479739 482626 Lele13g0043 13 479739 482626 ECH
Lele13g0043 13 479739 482626 Lele15g2400 15 28269966 28272411 hybridization
Lele13g0043 13 479739 482626 Lele16g2358 16 23988248 23991041 hybridization