Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0042 ATGGCTGTACCAGTGATGAGGATCGTTCCTTCGCTTCTGTTACTCTTCTGTTTCTCCTCTGTTTTACTACTACTCTGTAATGGCAAGTCAGATTCAGATGCAGATGGTGATTCGTCTTCTACATTGAGGTTGCTTTTGGAGGTGAAGAAGTCATTCATGGAGGACACAGAAAATGTTTTGGCTGATTGGTCTGAGAGCAACACGGATTACTGTAGCTGGAGAGGGATTACTTGTGGATTGAACTCCATGTTAATAGTGGGACTTAACCTTTCTGACTCGTCACTCACTGGGTCAATCTCTCCCTCACTCGGTCTCTTACAGAACCTGCTCCAACTTGATCTTTCTTCTAACCGACTTACTGGTCCCATCCCACCTGCTCTCTCCAATATCTCTTCTTTGGAGTATCTGCTTCTCTTCTCTAACCAACTCACTGGTCACATCCCCACTCAGCTCGGCTCGCTTACGAGTCTCCGAGTCATGCGAATCGGCGACAACCCGTTGACAGGTCCTATTCCTTCGTCTTTTGGGAACTTATTTAGCCTCGTGACCCTTGGTTTAGCCTCTAGTACTCTCACTGGGTCTATCCCATCGCAACTCGGACGACTCAATCAGCTTGAGAATCTTATTCTTCAAGAGAATGAACTCACAGGTCCGATTCCACCCGAGTTGGGAAACTGTTCGAATCTCACTGTTTTCACTGCTGCAAACAACGGTCTCAATGGGACTCTTCCAAGTGAACTTGGTGGTCTTGAGAATCTTCAGATTCTCAACCTCGCGAACAACAGTATAAAAGGGGATATTCCGAGTCAACTCGGGAATCTGAGTCAACTCGAGTATTTGAATCTCATGGGCAACCAACTCGTAGGTCATATTCCATCATCTTTAGCTCAACTAGGTAGTCTTCAAAATCTGGACTTGTCGTTCAACAAGCTTGTTGGCGGGATTCCTGAAGAACTTGGAAACATGGGTGAGCTACAATACATGGTTCTGTCTGGGAATCATCTCTCAGGGATCATCCCAAGAAGCATATGTTCCAACATGACAAGTTTGGAGCATTTGATGTTGTCGGATACTGCACTGTCTGGTGAGATTCCAAGGGAATTAAGCCAATGTCAATCCATGAAACAACTTGATCTGTCAAACAATTCCTTAAATGGATCAATACCCATTGAACTTTATGAAATGACTGAGTTAACTGATTTGTTACTCAATAACAACAGCTTGCTTGGCTCAATCTCTCCTTTCATAGGAAATCTCAGTAACATGAACACACTCGCATTGTTCCACAACAATTTACAAGGTTCTCTCCCAAGAGAGATTGGGATGCTGGGTAATTTGGAGATTCTGTTTCTATATGATAATCGGTTATCTGGTGAGATTCCTATGGAGATCGGTAATTGTTCAAGCTTGCAGATGATTGATTTCTTCGGGAACAAGTTTTCTGGGGAAATTCCCATCACTATTGGAAGGCTTAAACATTTGAATTTCCTTCATCTCAGACAGAACGAGCTTGTGGGAGAGATTCCAACCACTTTAGGTACTTGTCATAAACTAACTATTATTGATTTAGCCGACAATTATCTCTCAGGTGGGGTTCCTTCAACGATTGGATTACTCAAAGATTTGGAGCAACTCATGCTTTATAACAATTCACTTGAAGGGAATCTTCCTCACCAACTGATAAATCTCGAGAATCTGACAAGGGTGAATCTTTCGAAGAACAGATTTAATGGTAGTTTATCTTCATTATGTGGCTCTCGGAATTTTCTGTCTTTCGATGTCACTAACAATGAATTTGATGGTGAGATTCCATCCCAGCTGGGAAATTCACTTTCTCTTGAGAGGCTAAGGTTAGGAAAGAACAAGCTTTCTGGGGAAATCCCAAGGACATTGGGGAAAATTGAAGAGCTTTCATTGTTAGATCTGTCTGAAAATTCTCTCATCGGACCGTTACCGGCAGAGATTTCCTTGTGCAAGAAGCTAGCTCATATAGATTTGAACAATAATATGCTATCCGGGCCAATTCCATCGTGGCTTGGAAGCTTGCCTCAGTTGGGAGAGATTAAATTATCTTTGAATCAGTTTTCTGGGAATCTTCCATCAGAGTTATTCACATGTTCTAAATTGCTAGTTCTCCACCTAAACAGCAACTCTCTTAATGGAAGTATTCCTGATGATATGGGTAATCTCACATCCCTTAATATCCTCAATGTTGAGCAGAACAATTTCTCGGGACCGGTCCCTCCGGCGATAGGCAAGTTGAGCAAGCTTTATGAGCTGAGAATGTCCAGGAACAGCTTTAATGGTGAGATTCCAAGTGAGCTTGGAAGGCTGCAGAATCTCCAAAGCATGTTAGACCTCAGTTACAACAATCTCTCAGGTGAAATCCCGCCTTCGCTCGGGACATTGGCGAAGTTGGAAGATCTTGATCTGTCTCACAATCAACTCACAGGACAAGTACCTCTTCAAGTTGGTGAAATGAGCAGCTTGGGAAAACTTGATCTTTCTTACAATAACCTTGAAGGTGAATTAAATGAGCAATTTTCCCATTGGCCACCTAAGGCTTTTGAAGGTAATTCAAATCTTTGTGGAGGCCCTCTTAAACACTGTGACGATACCGATGGTGGTCGTTCGAGCAATCGCCTGTTAGCCCTGAGCAAAACATCAGTAGTGATAATCTCAGCTCTTTCAACATTAGCAGCAGTGGCACTAGCAATACTTGCAGTAAGAATATTCATGAAGAACAAGCAAGAATTCCTCAGAAAAGGCAGCCAAGTGAACTATATTTACTCCTCATCCTCTTCTTCATCATCACGAGCGCAACGAAGACCACTCTTCCGGTACAACATAGCCGCGAAGCGAGACATAAGGTGGGAGCACATCATGGAGGCGACTGAGAATCTAAGCGACGAGTTCATAATCGGTTCGGGAGGGTCCGGGACGATCTACAGAGCGGAATTGGCATCAGGAGATACGGTGGCGGTGAAGAAGATCTCGGGAAAAGATGACTTCATGCAGAACAAGAGCTTTGTGAGAGAAGTGAAGACTCTGGGGAGGATAAGGCATAGGCATTTGGTGAAGCTGATGGGATATTGCAGCAACAAGAAGAAAGGAGAAGGATGGAATCTGCTGATATATGAGATGATGGAGAATGGGAGTGTTTGGGATTGGTTACATGGGAAACCAGAAAAAACCAGGAGGAGGCTAGATTGGGAAGCAAGGTTTAAGATTGCAGTGGGATTAGCAAGAGGACTGGAATATTTGCATCATGATTGTGTTCCGAAGATCATACATAGAGATATCAAATCCAGCAATGTGTTGTTGGATTCTAAAATGGAGGCTCACTTGGGAGATTTTGGATTGGCAAAAGAACTCAACTTTGACAACTCCAATACCGAGTCGAATTCTTGGTTTGCTGGCTCCTATGGCTACATGGCTCCAGAGTGTGCGTACTCGTGGAAGGCAACAGAGAAGAGTGATGTGTACAGCATGGGGATAGTGTTGATGGAGCTGGTGAGTGGGAAGATGCCAACGGATGAATCATTTGGAGCTGACTTGGATTTGGTCAGATGGGTTGACATGAACATTCAGACGCGTTCTCAGGAACTGATTGATCCTCAGCTCAAGCCTCTGTTGCCGGCCCAAGAGTTTGCGGCATTCCAAGTGCTCGAGGTTGCCTTGCACTGCACCAAAACGACGCCGCATCAAAGACCGTCTTCGCGCCAAGTCTGCGATCTTCTCCTTCATGTCTTCAGCAACAGAGTGCTTGACTTTGACAAGATCAACCTGAATCGCCACGAGTGA 3804 0.4414 MAVPVMRIVPSLLLLFCFSSVLLLLCNGKSDSDADGDSSSTLRLLLEVKKSFMEDTENVLADWSESNTDYCSWRGITCGLNSMLIVGLNLSDSSLTGSISPSLGLLQNLLQLDLSSNRLTGPIPPALSNISSLEYLLLFSNQLTGHIPTQLGSLTSLRVMRIGDNPLTGPIPSSFGNLFSLVTLGLASSTLTGSIPSQLGRLNQLENLILQENELTGPIPPELGNCSNLTVFTAANNGLNGTLPSELGGLENLQILNLANNSIKGDIPSQLGNLSQLEYLNLMGNQLVGHIPSSLAQLGSLQNLDLSFNKLVGGIPEELGNMGELQYMVLSGNHLSGIIPRSICSNMTSLEHLMLSDTALSGEIPRELSQCQSMKQLDLSNNSLNGSIPIELYEMTELTDLLLNNNSLLGSISPFIGNLSNMNTLALFHNNLQGSLPREIGMLGNLEILFLYDNRLSGEIPMEIGNCSSLQMIDFFGNKFSGEIPITIGRLKHLNFLHLRQNELVGEIPTTLGTCHKLTIIDLADNYLSGGVPSTIGLLKDLEQLMLYNNSLEGNLPHQLINLENLTRVNLSKNRFNGSLSSLCGSRNFLSFDVTNNEFDGEIPSQLGNSLSLERLRLGKNKLSGEIPRTLGKIEELSLLDLSENSLIGPLPAEISLCKKLAHIDLNNNMLSGPIPSWLGSLPQLGEIKLSLNQFSGNLPSELFTCSKLLVLHLNSNSLNGSIPDDMGNLTSLNILNVEQNNFSGPVPPAIGKLSKLYELRMSRNSFNGEIPSELGRLQNLQSMLDLSYNNLSGEIPPSLGTLAKLEDLDLSHNQLTGQVPLQVGEMSSLGKLDLSYNNLEGELNEQFSHWPPKAFEGNSNLCGGPLKHCDDTDGGRSSNRLLALSKTSVVIISALSTLAAVALAILAVRIFMKNKQEFLRKGSQVNYIYSSSSSSSSRAQRRPLFRYNIAAKRDIRWEHIMEATENLSDEFIIGSGGSGTIYRAELASGDTVAVKKISGKDDFMQNKSFVREVKTLGRIRHRHLVKLMGYCSNKKKGEGWNLLIYEMMENGSVWDWLHGKPEKTRRRLDWEARFKIAVGLARGLEYLHHDCVPKIIHRDIKSSNVLLDSKMEAHLGDFGLAKELNFDNSNTESNSWFAGSYGYMAPECAYSWKATEKSDVYSMGIVLMELVSGKMPTDESFGADLDLVRWVDMNIQTRSQELIDPQLKPLLPAQEFAAFQVLEVALHCTKTTPHQRPSSRQVCDLLLHVFSNRVLDFDKINLNRHE 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0042 1267 Gene3D Ribonuclease Inhibitor 538 874 IPR032675 -
Lele13g0042 1267 Gene3D Ribonuclease Inhibitor 373 537 IPR032675 -
Lele13g0042 1267 Pfam Protein kinase domain 973 1244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0042 1267 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 582 874 - -
Lele13g0042 1267 SUPERFAMILY Protein kinase-like (PK-like) 953 1247 IPR011009 -
Lele13g0042 1267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1096 1108 IPR008271 GO:0004672|GO:0006468
Lele13g0042 1267 Gene3D Phosphorylase Kinase; domain 1 929 1048 - -
Lele13g0042 1267 SMART LRR_typ_2 827 858 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 250 274 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 202 226 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 106 129 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 347 371 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 298 321 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 322 346 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 491 515 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 754 778 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 539 563 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 443 467 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 803 825 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 130 154 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 682 706 IPR003591 -
Lele13g0042 1267 SMART LRR_typ_2 395 419 IPR003591 -
Lele13g0042 1267 SUPERFAMILY RNI-like 315 646 - -
Lele13g0042 1267 Pfam Leucine rich repeat 228 287 IPR001611 GO:0005515
Lele13g0042 1267 Pfam Leucine rich repeat 325 384 IPR001611 GO:0005515
Lele13g0042 1267 SUPERFAMILY RNI-like 88 409 - -
Lele13g0042 1267 Gene3D Ribonuclease Inhibitor 187 292 IPR032675 -
Lele13g0042 1267 Pfam Leucine rich repeat N-terminal domain 44 78 IPR013210 -
Lele13g0042 1267 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 38 199 - -
Lele13g0042 1267 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 485 581 - -
Lele13g0042 1267 FunFam Leucine-rich repeat receptor-like protein kinase 1049 1263 - -
Lele13g0042 1267 SUPERFAMILY L domain-like 616 867 - -
Lele13g0042 1267 Gene3D Transferase(Phosphotransferase) domain 1 1049 1257 - -
Lele13g0042 1267 PRINTS Leucine-rich repeat signature 374 387 - -
Lele13g0042 1267 PRINTS Leucine-rich repeat signature 803 816 - -
Lele13g0042 1267 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 291 390 - -
Lele13g0042 1267 SMART LRR_sd22_2 106 132 - -
Lele13g0042 1267 SMART LRR_sd22_2 250 276 - -
Lele13g0042 1267 SMART LRR_sd22_2 803 824 - -
Lele13g0042 1267 SMART LRR_sd22_2 539 565 - -
Lele13g0042 1267 SMART LRR_sd22_2 443 458 - -
Lele13g0042 1267 SMART LRR_sd22_2 298 317 - -
Lele13g0042 1267 SMART LRR_sd22_2 610 639 - -
Lele13g0042 1267 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 926 1048 - -
Lele13g0042 1267 Gene3D Ribonuclease Inhibitor 40 186 IPR032675 -
Lele13g0042 1267 ProSitePatterns Protein kinases ATP-binding region signature. 974 997 IPR017441 GO:0005524
Lele13g0042 1267 FunFam Uncharacterized protein 391 484 - -
Lele13g0042 1267 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 204 275 - -
Lele13g0042 1267 Gene3D Ribonuclease Inhibitor 293 366 IPR032675 -
Lele13g0042 1267 ProSiteProfiles Protein kinase domain profile. 968 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0042 1267 ProSiteProfiles Leucine-rich repeat profile. 252 275 IPR001611 GO:0005515
Lele13g0042 1267 PANTHER UNNAMED PRODUCT 536 1179 - -
Lele13g0042 1267 SMART serkin_6 968 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0042 Lele-ChrLele13 456424 460389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0042 45 707 Receptor kinase-like Gene Family AT1G17750 36.024 4.98e-103 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g0042 Pkinase 2.2e-45 CL0016