Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0030 ATGGCATTTCCTAGCGAATCAAATTTTGCCAATGCTAGCAGCTCAACTAATATGGATAATTTTGGGGCTAACAATGGCAAGAAAGATAATGATACAAGGGAGCGCCTGAATGAGCAGACACCTTTTGATCGTCAAATTTTAACCGAAGCAAGCATAGCTGAGAGAACTGCTGAATGGGGCCTTGTGATGAACTCAGTTAGTTTTAAAGCAATAGGAGGAGTGCCAACCAGTTCCTCCTTCAATGGCGAAAGAAGCAAAAATTTGTCAGATAGATTTACTGCAGCTGTATCAACAAGGACATCCGAGGAATCAAATTATGAGCCAGAGTCATCGTCAGGGGCATTCCCAAGGGTATCACAAGAGTTGAAGGAAGCCTTGGCGACACTACAACAGACGTTTGTTGTCTCAGATGCAACTAAACCAGACTGCCCAATAATGTATGCCAGCAGTGGATTTTTCAATATGACAGGTTATTCTTCAAAGGAGGTCATTGGGAGGAATTGCCGGTTTCTTCAGGGCCCTGAAACAGACCAGAAAGAAGTGGCAAAAATTCAAGATGCAGTTAAAAATGGGAGAAGCTTTTGTGGCAGGCTTTTAAACTACAAGAAAGATGGAACCCCATTCTGGAATCTTCTCACTGTCACTCCTATAAGGGATAGCCAGGGCAATGTCATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAATTCACTGAAGGTGTGAATGAAAAGGCGTTACGGCCAAATGGATTGTCCAAATCATTAATTCGTTATGATGCCCGTCAAAAGGAGAAAGCTTTGGGTTCCATCACAGAGGTTGTCCAAACTGTCAGGGACCCAAAATACATCATTCGGTCTGTGAGCCATGACAATTCCAGTAAGCTTGAAGAGCAAGAAAAAATCAATTCTGATTTTGTTTTGCCAAAGTCTGTTGAAATTGAGAGTACTAGTTCAACAAATGGCCAAACTGCTTCACTAGACTTCCAAGGTGATAAAAGCAAAAGGAAGTCAGGGCGCGTTTCTTTCATAAGTTTTAAAGGGAGATCTCTAAGCTCTATGGAAAAGCTTGATGAAAGGCCCATTGTTGAGCCAGAGGTTTTGATGACTAAGGACATGGAACGTTCTAACAGTTGGGAGCGTGCTCAAAGAGAGAGGGACATACGACAGGGAATTGATCTAGCAACCACATTGGAGCGCATTGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGACAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACAGAATATACGCGTGAAGAAATTTTGGGGAGAAACTGTCGGTTTCTTCAAGGACCGGAAACAGATCAAGCAACTGTCCAAAAGATTAGAGATGCTATAAGAGAACAGAGGGAAATCACAGTTCAGCTGATCAACTATACCAAGAGTGGAAAGAAGTTCTGGAATTTGTTCCACTTGCAGCCTATGCGTGATCATAAGGGTGAGCTACAATATTTTATAGGCGTCCAATTAGATGGAAGTGATCATGTAGAACCTTTAAGAAACCGCCTATCTGAGAGAACAGAGCAAAAAAGTGCAAAGTTGGTCAAAAAAACTGCAGAAAATGTTGATGAGGCTGTCCGAGAGCTTCCTGATGCCAACATGAGACCGGAAGATTTGTGGGCAATTCATTCTCAGCATGTCTTCCCAAGACCTCATAAAAAGGAAAGTTCTTCTTGGTTAGCAATACATAAGTTAACTGCAAGTGGTGAAAAAATTGGTCTGCATCATTTTAAGCCAATAAGGCCATTGGGTTGTGGAGATACTGGCAGTGTTCACCTTGTGGAGCTTCAAGGTGCAGGTGAACTATATGCAATGAAGGCAATGGAAAAATCAATCCTGCTAAATCGTAATAAGGTTCATCGAGCATGCATTGAGAGAGAGATTATATCGTTGCTGGATCATCCTTTTCTCCCCACTCTATACACTTCTTTTCAGACTTCTACACATGTATGTTTGATAACAGACTTCTTCCCCGGTGGTGAATTGTTTGCATTGTTGGATATGCAACCCATGAAAATTTTCAAGGAGGAATCAGCAAGATTCTATGCAGCAGAGGTTGTTATTGGTTTAGAATACCTCCACTGCTTAGGTATAATTTATCGAGACCTGAAGCCTGAAAATATTTTACTTCAGAAGGATGGTCACATTGTATTAGCTGATTTTGATTTATCATTAATGACTGCTTGTAAACCCCAGATTGTGAAGCATCCTCCACCTAGGAGAAGATCGCGAAGTCAACCACCGCCAACATTTGTTGCGGAGCCTAATGCACAATCAAACTCCTTTGTTGGAACAGAAGAATACATAGCTCCTGAAATTATAACTGGAGCTGGGCATAGCAGTGCTATAGATTGGTGGGCTCTTGGTACATTGTTGTATGAAATGCTCTATGGTCGCACACCATTCAGAGGAAAGAACAGGCAGAAGACATTTGCCAACATCTTGCACAAAGATCTAACCTTTCCAAGCAGTATCCCGGTAAGTCTTGCAGGCAGGCAGTTGATTAATGCACTATTACAAAGAGACCCAGCCAACCGTTTAGGTTCAAGTACTGGAGCCAATGAAATCAAGCAACATCCGTTTTTCCGTGGAATCACTTGGCCTTTAATCCGTTACATGAATCCACCGCCTTTAGAAGCTCCTCTTAAATTAATAGGGAAAGACCCAATACAGAAAGAAGTGAGATGGGAAGATGATGGAGTGCTTGTTCGCTCAATGGATTTGGATATCTTCTGA 2775 0.4173 MAFPSESNFANASSSTNMDNFGANNGKKDNDTRERLNEQTPFDRQILTEASIAERTAEWGLVMNSVSFKAIGGVPTSSSFNGERSKNLSDRFTAAVSTRTSEESNYEPESSSGAFPRVSQELKEALATLQQTFVVSDATKPDCPIMYASSGFFNMTGYSSKEVIGRNCRFLQGPETDQKEVAKIQDAVKNGRSFCGRLLNYKKDGTPFWNLLTVTPIRDSQGNVIKFIGMQVEVSKFTEGVNEKALRPNGLSKSLIRYDARQKEKALGSITEVVQTVRDPKYIIRSVSHDNSSKLEEQEKINSDFVLPKSVEIESTSSTNGQTASLDFQGDKSKRKSGRVSFISFKGRSLSSMEKLDERPIVEPEVLMTKDMERSNSWERAQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVQKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSERTEQKSAKLVKKTAENVDEAVRELPDANMRPEDLWAIHSQHVFPRPHKKESSSWLAIHKLTASGEKIGLHHFKPIRPLGCGDTGSVHLVELQGAGELYAMKAMEKSILLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTSTHVCLITDFFPGGELFALLDMQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHIVLADFDLSLMTACKPQIVKHPPPRRRSRSQPPPTFVAEPNAQSNSFVGTEEYIAPEIITGAGHSSAIDWWALGTLLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLAGRQLINALLQRDPANRLGSSTGANEIKQHPFFRGITWPLIRYMNPPPLEAPLKLIGKDPIQKEVRWEDDGVLVRSMDLDIF 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0030 924 SMART serkin_6 590 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0030 924 Gene3D Transferase(Phosphotransferase) domain 1 674 885 - -
Lele13g0030 924 CDD PAS 145 234 IPR000014 -
Lele13g0030 924 MobiDBLite consensus disorder prediction 1 25 - -
Lele13g0030 924 ProSiteProfiles PAC domain profile. 192 246 IPR000700 -
Lele13g0030 924 Gene3D PAS domain 378 542 - -
Lele13g0030 924 SMART pac_2 466 508 IPR001610 -
Lele13g0030 924 SMART pac_2 195 237 IPR001610 -
Lele13g0030 924 MobiDBLite consensus disorder prediction 746 769 - -
Lele13g0030 924 Gene3D Phosphorylase Kinase; domain 1 589 673 - -
Lele13g0030 924 ProSiteProfiles PAC domain profile. 463 517 IPR000700 -
Lele13g0030 924 Pfam Protein kinase domain 592 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0030 924 TIGRFAM sensory_box: PAS domain S-box protein 144 235 IPR000014 -
Lele13g0030 924 TIGRFAM sensory_box: PAS domain S-box protein 415 507 IPR000014 -
Lele13g0030 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Lele13g0030 924 SUPERFAMILY PYP-like sensor domain (PAS domain) 139 231 IPR035965 -
Lele13g0030 924 FunFam Putative LOV domain-containing protein 674 887 - -
Lele13g0030 924 PANTHER FLIPPASE KINASE 1-RELATED 97 892 - -
Lele13g0030 924 MobiDBLite consensus disorder prediction 1 41 - -
Lele13g0030 924 FunFam LOV domain-containing protein 378 542 - -
Lele13g0030 924 CDD STKc_phototropin_like 588 898 - -
Lele13g0030 924 FunFam LOV domain-containing protein 589 673 - -
Lele13g0030 924 CDD PAS 412 504 IPR000014 -
Lele13g0030 924 SMART pas_2 391 460 IPR000014 -
Lele13g0030 924 SMART pas_2 120 189 IPR000014 -
Lele13g0030 924 FunFam Putative LOV domain-containing protein 132 288 - -
Lele13g0030 924 ProSiteProfiles Protein kinase domain profile. 590 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0030 924 MobiDBLite consensus disorder prediction 96 115 - -
Lele13g0030 924 SUPERFAMILY PYP-like sensor domain (PAS domain) 408 504 IPR035965 -
Lele13g0030 924 ProSiteProfiles PAS repeat profile. 118 191 IPR000014 -
Lele13g0030 924 ProSiteProfiles PAS repeat profile. 389 462 IPR000014 -
Lele13g0030 924 Gene3D PAS domain 132 302 - -
Lele13g0030 924 SUPERFAMILY Protein kinase-like (PK-like) 567 898 IPR011009 -
Lele13g0030 924 MobiDBLite consensus disorder prediction 26 40 - -
Lele13g0030 924 Pfam PAS domain 412 504 IPR000014 -
Lele13g0030 924 Pfam PAS domain 139 235 IPR000014 -
Lele13g0030 924 ProSitePatterns Protein kinases ATP-binding region signature. 596 619 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0030 Lele-ChrLele13 334072 348822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0030 50 923 AGC Kinase Gene Family AT5G58140 74.634 0.0 1320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele13g0030 Pkinase 1.6e-58 CL0016