Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1241 ATGAAAACCCTAACGCAAGTCTTGGCCAAGACAGCGGCAGTCATCGAGAAGAAGGTCCAGACCACCGTGCAGGAGGTCACCGGACCCAAGGCTCTCCAGGACTATGACCTCCTTGATCAGATCGCGTCCGCTGGGCCTGGTCTCGCATGGAGGCTTTACTCGGCTAGGCCTAAGGAGCCATCGCGCCAGCAGCAGTACCCCCTTGTTTGTGTTTGGGTACTGGACAAGCGGGTGCTGTCCGAGGCGCGAATGCGTGCTGGGCTGACCATGGCAGCTGAAGATTCGTTTTTGGATTTGATTCGGGCCGATGCGGGTAAACTGGTGCGATTGAGGCATCCCGGGGTGGTGCATGTGGTGCAAGCATTGGATGAGAGTAAGAATGCGATGGCAATGGTGACTGAGCCCTTGTTTGCATCGGTGGCTAACATTCTTGGGAATTTGGAGAATGTTGCCAATGTTCCTAAGGATCTCAGGGGAATGGACATGGGACTGTTGGAAGTGAAGCATGGGTTACTTCAGGTAGCAGAATCCCTGGACTTCCTGCACAACCATGCCCATCTTATTCATCGAGCGATATCACCAGAGAATATTCTTATCACCTCAAGTGGAGCTTGGAAACTTGGTGGATTTGGTTTTGCAGTTTCAGCAGCTCAGGCCTCTGGTGACTCCACTGGTCTGCAAGCTTTCCATTATGCTGAATATGATGTTGAGGACTCTATTCTTCCACTTCAGCCATCACTTAATTACACTGCTCCTGAGCTGGTTAAGAGCACTGTGTCTTCAGCTGGCTGGGCTTCTGATATTTTCAGTTTTGGTTGCGTTGCTTACCATTTAATTGCTCGCAAGCCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGTGGCACATTCTCATCCATTCCACCGGAGTTGGTTCCTGACTTGCAGAGGATGCTATCTTCAAATGAGTCTTCAAGACCAACTGCAATAGCTTTTACAGGCTCCCCTTTTTTTCGGAATGACACTAGGTTGCGTGCTCTTCGCTTCCTTGACCATATGCTTGAAAGAGATAACATGCAGAAGTCAGAATTCTTAAAAGCTTTGTCAGATATGTGGAAAGATTTTGACAGCCGTGTATTGCGGTACAAGGTCCTTCCACCTCTCTGTGCTGAACTTAGGAATGTGGTAATGCAGCCAATGATTCTTCCTATGGTTCTTACTATTGCAGAATCTCAGGATAAAGGTGATTTTGAGATCACAACTCTTCCAGCACTCGTTCCTGTCTTGAGTGCTGCAGCAGGTGAGACATTGTTGCTACTTGTGAAGCATGCAGAACTTTTAATAAACAAGACTAGTCAGGATCATTTAGTTTCACATGTTCTGCCTATGGTTGTACGGGCTTACGATGAAAATGATGCTCGTGTTCAAGAAGAGGTTCTGAAGAAATCTATATCCCTTGCTAAGCAACTTGATACCCAGCTGGTCAAACAAGTGGTTTTGCCTCGGGTTCATGGCTTAGCGCTTAAAACAACGGTTGCTGCGGTTAGAGTCAATTCGTTGCTGTGCTTAGGAGACATGGTTAGCCGACTTGATAAACCTGCTGTCCTAGACATCTTGCAGACTATTCAGCGCTGTACTGCTGTTGACCGTTCTCCTCCTACCCTTATGTGTACACTGGGGGTTGCAAATTCTATTTATAAGCGGTATGGAGTAGAGTTTGTTGCCGAGCATGTGCTTCCATTGGTCATACCCCTCCTGACAACTCAACAACTGAATGTTCAGCAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTAAGGATGATAGAGGAGAAGCGAGGAGTGGCTGTGACGGAATCTGGAACCCCAGAGGTCGCCAAACCGTTTCCTCCAATTAATGGTCTTCATGAAGCCACTACTAAAACAAACAGCGCTCTTGCTTCTTCAACCAAGAGCATCTCTGCCTGGGATGAAGATTGGGGTAGCACTGCGAAAGGGACTTTCACTTCTTCCCAAAGTTTTACTGACAAATCAAGTCAACCTGTGCCAGGAATCCCAATGGTTCAAATTACATCCTCTCAGCAACATTCATCCTCATCTGCCGTGTCTAATCAGCAGGCAACCATGTCATGCCCCTCAGTGGATTTAGAGTGGCCTCCTCGTGCTTCTGCTGCTGGTAACCAATCTTTAGGTGACTCTGAAAGTCAAATGAAGACAACAGGAACCTCTTCTATGTCTAGTCTTGATGACATTGATCCTTTTGCTAATTGGCCTCCACGTCCTAGTGGCTCATTTGGTGTATCTGGAATTTCCAACAATGGTACTTTAGCACCACCACTAAACAAAAATTGGCCTAGTTTAATGTCAAACTCCTCTAATGCGATGAATAATCAAATCAACAATAGTTGGTCTTTTAATCCCCCAAGTTCAGCAGATCCAATTGGTTTGAACCTTGGTGATTCTAGTTCAACCACTGGTAGTATGCATGGTGGTATAAATTCTCTGAATTCTCTTGCGTACTTAAAGCAGAGTCATGGATTTCCAGCACCCAATGTTCCCCGTGCAGAGAACAAGTCAACAGATCTTGGATCCATCTTTGCTTCTGATCAGAATGACCTGATTGCACCTAAGCTTGCACCACCGCCCTCAACCGCAGTGGGTAGAGGTAGAGGTAGAGGAAGAGGGAGGGCAGCTGCTTCAAGCATCAGGTCCACTCAAACCAAGTCTGAGGGGCCACCCCTTATGGATTTGTTGGGGTAG 2769 0.4677 MKTLTQVLAKTAAVIEKKVQTTVQEVTGPKALQDYDLLDQIASAGPGLAWRLYSARPKEPSRQQQYPLVCVWVLDKRVLSEARMRAGLTMAAEDSFLDLIRADAGKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASVANILGNLENVANVPKDLRGMDMGLLEVKHGLLQVAESLDFLHNHAHLIHRAISPENILITSSGAWKLGGFGFAVSAAQASGDSTGLQAFHYAEYDVEDSILPLQPSLNYTAPELVKSTVSSAGWASDIFSFGCVAYHLIARKPLFDCHNNVKMYMNTLTYLSSGTFSSIPPELVPDLQRMLSSNESSRPTAIAFTGSPFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVMQPMILPMVLTIAESQDKGDFEITTLPALVPVLSAAAGETLLLLVKHAELLINKTSQDHLVSHVLPMVVRAYDENDARVQEEVLKKSISLAKQLDTQLVKQVVLPRVHGLALKTTVAAVRVNSLLCLGDMVSRLDKPAVLDILQTIQRCTAVDRSPPTLMCTLGVANSIYKRYGVEFVAEHVLPLVIPLLTTQQLNVQQFAKYMLFVKDMLRMIEEKRGVAVTESGTPEVAKPFPPINGLHEATTKTNSALASSTKSISAWDEDWGSTAKGTFTSSQSFTDKSSQPVPGIPMVQITSSQQHSSSSAVSNQQATMSCPSVDLEWPPRASAAGNQSLGDSESQMKTTGTSSMSSLDDIDPFANWPPRPSGSFGVSGISNNGTLAPPLNKNWPSLMSNSSNAMNNQINNSWSFNPPSSADPIGLNLGDSSSTTGSMHGGINSLNSLAYLKQSHGFPAPNVPRAENKSTDLGSIFASDQNDLIAPKLAPPPSTAVGRGRGRGRGRAAASSIRSTQTKSEGPPLMDLLG 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1241 922 MobiDBLite consensus disorder prediction 729 751 - -
Lele12g1241 922 Pfam Protein kinase domain 107 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1241 922 Gene3D - 345 616 IPR011989 -
Lele12g1241 922 SMART serkin_6 35 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1241 922 MobiDBLite consensus disorder prediction 876 922 - -
Lele12g1241 922 ProSiteProfiles Protein kinase domain profile. 38 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1241 922 Gene3D Transferase(Phosphotransferase) domain 1 100 344 - -
Lele12g1241 922 CDD PK_SCY1_like 41 342 - -
Lele12g1241 922 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 34 906 - -
Lele12g1241 922 SUPERFAMILY Protein kinase-like (PK-like) 32 344 IPR011009 -
Lele12g1241 922 SUPERFAMILY ARM repeat 342 601 IPR016024 -
Lele12g1241 922 MobiDBLite consensus disorder prediction 722 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1241 Lele-ChrLele12 19362607 19374713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1241 100 345 CBL-interacting serine-threonine protein kinases AT2G26980 25.296 3.72e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Lele12g1241 Pkinase 4.9e-23 CL0016