Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1236 ATGGTTAGGAGTAAGGTGACGTTCCTCTTATTGAGGTTGGCTTTTAAAATCAAAATGGAAGCTCCCCTGGATGATGGAAATAGGGTCGTGCAAACTTCTGGGGATGCTAGCATGAGTGCACATGAAGATCACATAAATCAAGAACCATACGAAGGTATGTTGTTTGAATCGGAAAAAGCTGCAAGAGAATTCTATGATAACTACGCCTCACGGGAAGGATTCACAGCTCGTGTTGTTTCATCACGAAAGTCCGAGAGAGACGGTTCGATCATCTCTCGTGGACTTGGATGTAATAGTCGAACAAAAACTACAGTTGAGAAGCAAGATCGCCAAAATGTTTGTACAGCAATGATTCTGTTGAGGAGAGAAAAGGATGGGGAATGGGTCATCCGGAAATTCTTTAAGGACCATAATCGTCCAGTGATGGTTGACTTGGAGAAAACTCCTCGAACACTTGATGAGAAGGATAAGAAAATTCAAGAATTGACTGCTGAAGTGCTGGTTAAGAAACGACTAAGTTCATCATACCGGGAGCAGCTAGAAACATTGTTGAAGGATATTGAAGGCTACGGTGAACATATCTCCAAGAAAATCCGTTCAGTTAATGAAACTCTTAGGAAACTCGACGCTTAG 633 0.4202 MVRSKVTFLLLRLAFKIKMEAPLDDGNRVVQTSGDASMSAHEDHINQEPYEGMLFESEKAAREFYDNYASREGFTARVVSSRKSERDGSIISRGLGCNSRTKTTVEKQDRQNVCTAMILLRREKDGEWVIRKFFKDHNRPVMVDLEKTPRTLDEKDKKIQELTAEVLVKKRLSSSYREQLETLLKDIEGYGEHISKKIRSVNETLRKLDA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1236 210 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 204 - -
Lele12g1236 210 Pfam FAR1 DNA-binding domain 63 141 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1236 Lele-ChrLele12 19272751 19273562 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele12g1236 FAR1 9.8e-16 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0010 09 83797 90432 Lele12g1236 12 19272751 19273562 hybridization