Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1204 ATGGATCCATCTTGTATAACCGGACCTTTATGGGAAATGACCAAGAGTTTGTGTGGCAGCCTCAAGAATGAAGCCGCTCATGTTTACAACTTGGAAGAAAATCTGCAATCACTTGAAGAAAAATCCCAAAAGCTTGAAGATATGAAGAAGGATGTGGAAGCAAATATTGAAGTAGTCGAAATTAGCAGAGAAATGCAAAGGTCTCATCAAGTCAGGGGTTGGCTGAAAAGAGTCGTGAGCATTCAACAGGAAATAAAAGATATTCATGTTCGGCGAACTAAACAAATTCAAAGCAAATGTCTTGGTAAATGCCCAAAGAATTGCTTGGCAAGCTACAAGTTAGGAAAGGATATTGCCAAGATTCTAAGGAATGTAGATGAACTAGAAATTGAAGGGGAAGGGTTTTGTAAGGATTTTAAAATTGCCCTCAAGCGTCTGCATAAGGCAATTGCGATGCCTTCTGGTGAGACGGTGGGCTTAGATTTAATGTTTGATAAGGTATGGAAAAGTATTGAAGAAAAAGATGTTGGTATCATTGGCTTATATGGGATGGGCGGGGTGGGAAAGACTACCTTGCTAAAGAAAATTAATAATGAACTTGGGAAGAGATCGGATTTTTTCATTGTGTGGGTGGTGGTATCCAAAAGTCCCAACTTGGATAGTATTATGGACAACATCAGAAAACGGGCAGGGATTGACGATAACCTTTGGGAACGTTGTAGTAACCAAGATGTAAAAGCCGCAAAGATTTACGAAGTCCTAAAAGAGAAGAAATTTGTTCTGTTATTGGATGATATATGGAAGAAATTGGATTTAGAAAAGATGGGGGTGCCACATCCAAAGGAAACTAATTTTCAATCCAAAGTGTTATTCACAACACGATTTGAGGATGTGTGTGCGAAAATGGAAGCTCAAAGGAAATTCAAAGTTGAAGTTCTAACGGAAAAAGAAGCTCTACAGTTATTTCTTATGAAAGTTGGCGAGGAAACTCTAGAATCTAACCCTAACATTCAGAATATAGCAAAGGAGATGGCTAAAGAATGTAAAGGGCTGCCACTTGCCTTAACTGTGGTAGGTAGCGCCATGGCTGGTGTGAAGAGTGTGGAAGCATGGGAACACTCAAGGAATAACTTAACAAGTTCTTCATGGACAGCTTCAGATTGGGAGATAAGTGTGTTTTCTATCCTCAAGCTTAGTTATGATCAACTACCAGATGAAGCACACAAAAAATGTTTCTTATATTGCGCATTATACCCAGAGGATTATGAGATTCGAGTGGATAATCTCATTTATAAATGGATAGGGGAGGGATTTCTTGATAATGATAGAAGTGTACATGGTAAGCGTAGCTATGCTGGGTCCATAATTGAAAAGTTGAAGCTTTCATGCTTGTTGGAGAGTGCTGAAGATGTTATTGTCTTGGATCGCTCACGCTCAATTAAGATGCATGATGTCATTCGTGACATGGCATTATGGATAGCACGTGATGAAGATAGAAACAAGAAGAAGGTAGCTCGTATAGAGTAA 1527 0.3916 MDPSCITGPLWEMTKSLCGSLKNEAAHVYNLEENLQSLEEKSQKLEDMKKDVEANIEVVEISREMQRSHQVRGWLKRVVSIQQEIKDIHVRRTKQIQSKCLGKCPKNCLASYKLGKDIAKILRNVDELEIEGEGFCKDFKIALKRLHKAIAMPSGETVGLDLMFDKVWKSIEEKDVGIIGLYGMGGVGKTTLLKKINNELGKRSDFFIVWVVVSKSPNLDSIMDNIRKRAGIDDNLWERCSNQDVKAAKIYEVLKEKKFVLLLDDIWKKLDLEKMGVPHPKETNFQSKVLFTTRFEDVCAKMEAQRKFKVEVLTEKEALQLFLMKVGEETLESNPNIQNIAKEMAKECKGLPLALTVVGSAMAGVKSVEAWEHSRNNLTSSSWTASDWEISVFSILKLSYDQLPDEAHKKCFLYCALYPEDYEIRVDNLIYKWIGEGFLDNDRSVHGKRSYAGSIIEKLKLSCLLESAEDVIVLDRSRSIKMHDVIRDMALWIARDEDRNKKKVARIE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1204 508 Gene3D - 313 399 IPR042197 -
Lele12g1204 508 FunFam Probable disease resistance protein At5g66910 312 399 - -
Lele12g1204 508 PRINTS Disease resistance protein signature 348 362 - -
Lele12g1204 508 PRINTS Disease resistance protein signature 178 193 - -
Lele12g1204 508 PRINTS Disease resistance protein signature 253 267 - -
Lele12g1204 508 FunFam Probable disease resistance protein At1g61300 143 307 - -
Lele12g1204 508 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 36 498 - -
Lele12g1204 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 415 IPR027417 -
Lele12g1204 508 FunFam Probable disease resistance protein At1g63360 400 492 - -
Lele12g1204 508 Coils Coil 21 62 - -
Lele12g1204 508 CDD AAA 158 268 - -
Lele12g1204 508 Gene3D - 400 491 IPR036388 -
Lele12g1204 508 SMART AAA_5 175 314 IPR003593 -
Lele12g1204 508 Gene3D - 142 312 IPR027417 -
Lele12g1204 508 Pfam NB-ARC domain 163 401 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1204 Lele-ChrLele12 19023329 19025425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1204 175 507 WRKY Transcription Factor Family AT5G45050 23.324 3.50e-10 60.8