Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1189 ATGTCGAGCAATTCGCTGCCGCCATCGCATCCCTCTGACACATCGCCGACGGCTCCTACCGGCAATGATTCCACTTCGAAGATATCGTCGCCGGCATCATCCCGAGCCGAGCTCCAGAAAAGTCCTCCGATTCCCAGTCGGTGGACGACTACGATAGAGGATGAAGGCAAGGAGCAAAGGAATAATGAGGAGGCGATACGTAAACTAGAACAGGAGCGAATCGAAGATGCTACTTCTTCGACCTTGCTTGCATCTTCTTTAGGTCTCAATCACATTCGCACTCGCTCCGCTTCATCGCCTCTTCGGTTTCCCTCCTTGGCCGCCGCGTCTTCCACTCCCAGCAAGGATTCCGTCGGAACTGAGGATTGTACTAACGGAAAGAGAATATATGGAACTCAATGTAAATTGTCAAGAGCTCCTTCCCATGCTGTTCCTCTCATGCAGGGCAACGATGACACATTTGCCAAAGAAATGCAATCGCCGCGTGTTCAATCAATACTGCGAATGACAAGTGGACGCAAGAAGAAACCCATTGATTTCAAAAGCTACTCTTGTGAGCTCAACTCAAGAGGAGCCAAAACTTTGCCTACAGTTTGGAAAAATCGTACATTGGGGCATATTGAGGAGGTGACGGTGGCAATCAGAACTAAGTTTGGGAAGCTAAAGGAAGAAGTTGATTCTGACTTACGTGCTTTTGCTGGAGATTTGGTGGGACTACTGGAAAAAACTTCAGAATCTCATCCTGAATGGAGAGAGAGCTTGGAGGATCTGTTAATTATTGCCCAACAATGTGCAATGATGTCGCCTAGCGAGTTTTGGATGAACTGTGAAGCAATTGTTCAGAATTTAGATGACAGGCGTCAAGAGTTACAGATGGGGATTCTCAAGCAAGCTCATACACGACTACTGTTTATCCTCACTCGTTGCACCCGTCTCGTGCAGTTCAACAAAGAGCATGTCTTTGAACAAGATCACATTCTGGGTTTTCACCAACTCAGTGATCTTGGTATTTATAGAGAGCAAATTTTTAATGCTGTAGAACGTGGAAACGAGACGGCTGATGAGGAGCAGCTAACGAAGACTCATGGTAAAGAACTAGACAATCAGATAATAAATCAAACACAAATTGATCAGCATGAGAGCACTGCAACTGACACTTCCAGAAGTGGGGATTCAACTGCAAGCGGCTATAAGATTTCATCTTGGAAGAAGTTTCCAAGTCATAATGCTGAGAAGAATTGCAAAGGTCATGACGAAGCCGAAGATTTGCCATCCAACGAAGAAGAACAGGATCATCAGGTTCAAGTCAAAGATCAAGAAAATGTCGAAAACGTGGATACTGATTCATCGAATCTTGAACAGTCAGAACTATCCTCCAGGGCCCAGAAGCTACATTGGGGATTCTGGGGAGATCACCAGAATCTAACATATGAGAACTCAATGATCTGCAGAATCTGTGAGGTTGAGATACCAATTGTATATGTGGAGGAGCATTCTCAAATATGCACCATTGCTGATAGATGTGATTTAAAAGGGCTTACAGTGAATGAACGGCTTGAAAGATTTGCTGAAACTATTGAAAAGATAATAGAATCATGGACACCAAGAAGCACACCTAAAAGCAATACCCCAAAAAGCACTGATGGTCCTGGAGAAATTACCTTTGAGAATGCGAGAGCATCTATGTCAAGTTTGCATGATGAGTTCAATGATTTATCTCTAATTGAGAGAAACTGCTGCTTATCTCGCAGGGGCTCAGAAGACATGCTCGAATCTGTTACTGAAGATGACAATGCTTTTGTTAAGGATCATGACCTGAGCCTTTTGCCAAAAATGTCATGCGAAACATATTTGAAACATGATCATTGCTCAAAGATGTCTTCGGTTGGAAGCTTGACACCAAGATCACCACTGTTAACCCCACGAACAAGTCAGATAGAAATGTTATTAAGTGGGCGAAGAACAATATTGGAACTTGAAAATTATTTCCAGATTACAAAACTAGTGGAAATTGCTCGATCAGTTGCAAATGTGAATGACTACAACTATGTAAGTCGTCGCGTAGAAGAACTTAATCTCACCATTCAAGAAAGAAAGGTCGATGCTCTTATCGTCGAAACTTTTGGCCGTCGCATAGAAACTCTCTTGTCGGAAAAATATCTATCTCTTTGTCATCAAATAGACAACGAAAAGGTAGACTCATCGAATGGTTTGGTTGAAGAAGAGAGTTCAGTGGAAGATGATACCGTTCGAAGCCTTCGTGCTAGCCCAATTAACCCTTGTTCTAGGGACCGAACCTCCATTGAAGACTTTGAAATAATCAAACCAATAAGCAGAGGTGCATTCGGACGAGTTTTCCTCGCCCGGAAAAGAGCAACCGGAGATTTATTCGCTATCAAGGTTCTGAAAAAGGCTGATATGATACGTAAAAATGCAGTTGAAAGTATTTTGGCTGAACGAGACATTCTTATATCAGTTCGAAATCCCTTTGTGGTTCGATTTTTCTACTCTTTCACTTGTAGGGAAAACCTTTATTTGGTTATGGAATTTTTAAATGGTGGAGACCTTTATTCTCTATTGAGAAATCTCGGTTGCTTAGATGAAGATATGGCACGTGTATATATGGCAGAAGTTGTGCTTGCATTGGAGTATTTGCATTCTTTACATGTAATTCATAGAGACTTGAAACCTGATAACTTGTTAATTGGTCAAGATGGTCACGTCAAGTTGACAGATTTTGGGCTCTCCAAGGTTGGTCTTATTAACAGCACGGATGACTTGTCAACTTCATCATTTTCCACTGATGATCTTGTGGGAAACGATGGACAAAAAAGAGATCATTCTTCAAAAGTGGAACAACGTCAAAAGCAATCAGTTGTTGGCACCCCAGATTATTTGGCTCCTGAAATTCTTCTCGGCATGGGACATAGTGCAACTGCAGATTGGTGGTCTGTGGGTATTATACTTTATGAGCTCCTTGTGGGAATTCCACCATTTAATGCAGAGCATCCTCAGGAAATATTTGACAAAATAATTAATAGAGACATACAGTGGCCAAACATACCCGAGGAGATGAGCTTTGAAGCATATGATTTGATTGACAAATTACTTGCAGAGAATCCGGTCCAAAGATTAGGATCAACAGGAGCTGGTGAGGTCAAAAGACATCCTTTCTTCAAGGATATTAATTGGGATACCCTAGCAAGACAGAAGGCTGCGTTCATACCATCAGCTGAAAATCATGACACAAGTTATTTCATGAGCCGCTACATATGGAACCCAGAAGATGAACATCTTACTGGAGGTAGCGATTTTGACGACCTAACTGATTCTTGCTTCAGTGGTTCAGTAGGCAGTGACTTCATAGACGAAGATGGGGATGAATGTGGTAGCTTAGCAGAGTTTAGTGGGCCACCTCCTGAAGTGCAGTACTCATTTAGCAATTTCTCTTTCAAGAACTTGTCTCAGTTAGCATCCATCAATTATGATTTGGTGATCCAGAACGCCAAAGAATCAACCGATGACTCCAAGCCATCTGCTTCGTGA 3546 0.4236 MSSNSLPPSHPSDTSPTAPTGNDSTSKISSPASSRAELQKSPPIPSRWTTTIEDEGKEQRNNEEAIRKLEQERIEDATSSTLLASSLGLNHIRTRSASSPLRFPSLAAASSTPSKDSVGTEDCTNGKRIYGTQCKLSRAPSHAVPLMQGNDDTFAKEMQSPRVQSILRMTSGRKKKPIDFKSYSCELNSRGAKTLPTVWKNRTLGHIEEVTVAIRTKFGKLKEEVDSDLRAFAGDLVGLLEKTSESHPEWRESLEDLLIIAQQCAMMSPSEFWMNCEAIVQNLDDRRQELQMGILKQAHTRLLFILTRCTRLVQFNKEHVFEQDHILGFHQLSDLGIYREQIFNAVERGNETADEEQLTKTHGKELDNQIINQTQIDQHESTATDTSRSGDSTASGYKISSWKKFPSHNAEKNCKGHDEAEDLPSNEEEQDHQVQVKDQENVENVDTDSSNLEQSELSSRAQKLHWGFWGDHQNLTYENSMICRICEVEIPIVYVEEHSQICTIADRCDLKGLTVNERLERFAETIEKIIESWTPRSTPKSNTPKSTDGPGEITFENARASMSSLHDEFNDLSLIERNCCLSRRGSEDMLESVTEDDNAFVKDHDLSLLPKMSCETYLKHDHCSKMSSVGSLTPRSPLLTPRTSQIEMLLSGRRTILELENYFQITKLVEIARSVANVNDYNYVSRRVEELNLTIQERKVDALIVETFGRRIETLLSEKYLSLCHQIDNEKVDSSNGLVEEESSVEDDTVRSLRASPINPCSRDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEFLNGGDLYSLLRNLGCLDEDMARVYMAEVVLALEYLHSLHVIHRDLKPDNLLIGQDGHVKLTDFGLSKVGLINSTDDLSTSSFSTDDLVGNDGQKRDHSSKVEQRQKQSVVGTPDYLAPEILLGMGHSATADWWSVGIILYELLVGIPPFNAEHPQEIFDKIINRDIQWPNIPEEMSFEAYDLIDKLLAENPVQRLGSTGAGEVKRHPFFKDINWDTLARQKAAFIPSAENHDTSYFMSRYIWNPEDEHLTGGSDFDDLTDSCFSGSVGSDFIDEDGDECGSLAEFSGPPPEVQYSFSNFSFKNLSQLASINYDLVIQNAKESTDDSKPSAS 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1189 1181 ProSiteProfiles Protein kinase domain profile. 771 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1189 1181 SMART serkin_6 771 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1189 1181 MobiDBLite consensus disorder prediction 408 444 - -
Lele12g1189 1181 CDD STKc_MAST_like 777 1064 - -
Lele12g1189 1181 MobiDBLite consensus disorder prediction 533 554 - -
Lele12g1189 1181 MobiDBLite consensus disorder prediction 408 454 - -
Lele12g1189 1181 MobiDBLite consensus disorder prediction 1 48 - -
Lele12g1189 1181 MobiDBLite consensus disorder prediction 939 953 - -
Lele12g1189 1181 Gene3D Transferase(Phosphotransferase) domain 1 855 1077 - -
Lele12g1189 1181 Pfam Protein kinase domain 771 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1189 1181 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Lele12g1189 1181 ProSiteProfiles AGC-kinase C-terminal domain profile. 1060 1161 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele12g1189 1181 FunFam probable serine/threonine protein kinase IREH1 769 858 - -
Lele12g1189 1181 MobiDBLite consensus disorder prediction 533 550 - -
Lele12g1189 1181 SUPERFAMILY Protein kinase-like (PK-like) 768 1088 IPR011009 -
Lele12g1189 1181 MobiDBLite consensus disorder prediction 1 62 - -
Lele12g1189 1181 Gene3D Phosphorylase Kinase; domain 1 769 1086 - -
Lele12g1189 1181 MobiDBLite consensus disorder prediction 930 957 - -
Lele12g1189 1181 PANTHER SERINE/THREONINE-PROTEIN KINASE 441 1116 - -
Lele12g1189 1181 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1189 Lele-ChrLele12 18918397 18927611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1189 38 1180 AGC Kinase Gene Family AT5G62310 60.440 0.0 1333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lele12g1189 Pkinase 1.2e-64 CL0016