Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1186 ATGGCCAGACCCTCTCTTCTCTCTCTTTTCTCTCTCCTCGCTGCAGTCACCACCCTTGCCGCCGCCGCCTCGCCTTCAAACTTCATCAAAACTTCCTGCAGCACCACCACATACCCTTCCCTCTGCTATAAATCCCTCGCTGACTACGCCTCCACCATCCAACAAGACCCTCACCAGCTCGTCCAGACCGCCCTCTCCTACTCCCTCAACAAGACCTTCGAGACCCGAGCCTTCATATCCAAGCTCCGGTCCATCTCCGGCATGAAACCCCGCGAAGTCGCCGCCCTCCGGGACTGCATAGAAGAGATGGCGGACAGCGTGGAGCGGCTCGGCCGGTCCCTGAAGGAGCTGAAGCTGTGTAAGCCCAAGAGCGAGGACTTCTCATGGCACATGAGCAATGTTGAGACGTGGGTGAGCTCTGCCTTGACGGATGAGAGTACTTGCAGCGATGGGTTCGCCGGAAAAGTTTTGAACGGCAAAATCAAGGCTTCTATCAGAGCCAGAATGGTTAATGTTGCTCATGTCACTAGTAATGCTTTGTCTCTTATAAACAAGTATGCGTCTGGTATTTACTGA 576 0.5434 MARPSLLSLFSLLAAVTTLAAAASPSNFIKTSCSTTTYPSLCYKSLADYASTIQQDPHQLVQTALSYSLNKTFETRAFISKLRSISGMKPREVAALRDCIEEMADSVERLGRSLKELKLCKPKSEDFSWHMSNVETWVSSALTDESTCSDGFAGKVLNGKIKASIRARMVNVAHVTSNALSLINKYASGIY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1186 191 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 182 - -
Lele12g1186 191 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 186 IPR035513 -
Lele12g1186 191 FunFam Pectin methylesterase inhibitor 1 24 186 - -
Lele12g1186 191 SMART PMEI_2 24 182 IPR006501 GO:0004857
Lele12g1186 191 CDD PMEI-like_3 31 188 - -
Lele12g1186 191 Pfam Plant invertase/pectin methylesterase inhibitor 27 182 IPR006501 GO:0004857
Lele12g1186 191 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 186 IPR035513 -
Lele12g1186 191 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1186 Lele-ChrLele12 18901486 18902061 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1186 16 183 Carbohydrate Esterase AT1G53830 29.070 5.34e-21 87.8