Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1184 ATGGCTTCATCTTCAATTCCTTGTTCTCATTACAACACTTTCTTCTCAATGCTTCTTTCCTTTTCATTAATTATCTCGTCAATCTCCCACACGGCCATTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCACCTCCAATACCCTAGAAACCTACAAAGCTTTCATAAAAGAGTACTGTAGTTCGACCACATACCCCAAGAATTGCTACTGGTATCTCTCCCCTTATGCCTCAGTGATCAAAACAAGCCCTCTTGTTCTCACCAAGTCCTCTATTTATCTTGCTTTGAAGCAAAGCAGCAAGTCATATTATGCACTCAAATCGTTGACCCGAGTCAAGGGTCTTACTCGCAATGAAACCCTAGTCATCAAGGATTGTCTCGAGAACATTGACGATTCACTTGATGAGGTTAAGCAATCGGCGATCGCCGTCAAGGGCTTGATCGGTAGTAGCACCTCCGATGAGGCATTTGAGTGGAGTAACGTAAAGACATGGATGAGCGCCGCCCTTACAAGCTATAGCACCTGCACAGATGAGTTTGATGAGATGAAGATAAGAGCTTTGTTGCAGGACAAGATCACGAGCGGTGTCTCGAAAGCTCAAAACATGGTTAGCAGTGCTCTCTCAGTCGTCAACAAGTTCACCGATTTTTTATAA 678 0.4322 MASSSIPCSHYNTFFSMLLSFSLIISSISHTAIASSSSSSSSSSSSSSSSSTSNTLETYKAFIKEYCSSTTYPKNCYWYLSPYASVIKTSPLVLTKSSIYLALKQSSKSYYALKSLTRVKGLTRNETLVIKDCLENIDDSLDEVKQSAIAVKGLIGSSTSDEAFEWSNVKTWMSAALTSYSTCTDEFDEMKIRALLQDKITSGVSKAQNMVSSALSVVNKFTDFL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1184 225 TIGRFAM PME_inhib: pectinesterase inhibitor domain 44 220 IPR006501 GO:0004857
Lele12g1184 225 CDD PMEI-like_3 67 222 - -
Lele12g1184 225 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 222 IPR035513 -
Lele12g1184 225 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 221 IPR035513 -
Lele12g1184 225 PANTHER PECTINESTERASE INHIBITOR-LIKE 20 216 - -
Lele12g1184 225 Pfam Plant invertase/pectin methylesterase inhibitor 62 215 IPR006501 GO:0004857
Lele12g1184 225 SMART PMEI_2 58 217 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1184 Lele-ChrLele12 18893404 18894081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1184 32 223 Carbohydrate Esterase AT1G53830 30.151 1.21e-16 76.3