Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1165 ATGGAGAGATACAAGATGTTAGAGAAGGTGGGAGAAGGGACCTATGAGAAGGTATACAAGGCGAAGGATAAAGCCACCGGGCGGCTAGTGGCTCTGAAGATGATGCATCTGGAGATCGGCAGCCAAGGAATCCCTGGAACTACACTTCGAGAAATCTCCCTCCTTAAGATGCTCCGCATGTCCATCTACATCGTCCACTTGCTTTCTGTTGAGTACATCGACAAAACTTCAACTTCAAGTCCTTTCCTCTTCCTGGTCTTTGAGTACCTTGACACTGATCTTAAGAAGTACATGGATTCTCTCCGGCGAGATCCCGTCCATCGTTCTCTTTCTCCTTGCCGTATTCAGAGCTTCCTTTACAAGCTCTGCAGCGGTGTTCTTCACTGTCACAACCATGGTGTTCTGCATCGTGATCTCAAACCCCAGAATCTTCTTCTTAACGAGCTGAGAGGGATTCTCAAGATTGCTGACTTTGGTCTCGGACGAGCCTTCCATTACCCTGGTAAGAGCTACACAACTAACGTGGTCACACTTCGTTACAGAGCTCCTGAGATTCTGATGGGATCTACTCAATACTGCACTGCGGTTGACATGTGGTCCGTGGGATGCATTTTTGGTGTGTAA 624 0.4792 MERYKMLEKVGEGTYEKVYKAKDKATGRLVALKMMHLEIGSQGIPGTTLREISLLKMLRMSIYIVHLLSVEYIDKTSTSSPFLFLVFEYLDTDLKKYMDSLRRDPVHRSLSPCRIQSFLYKLCSGVLHCHNHGVLHRDLKPQNLLLNELRGILKIADFGLGRAFHYPGKSYTTNVVTLRYRAPEILMGSTQYCTAVDMWSVGCIFGV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1165 207 ProSiteProfiles Protein kinase domain profile. 4 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1165 207 Gene3D Transferase(Phosphotransferase) domain 1 89 206 - -
Lele12g1165 207 FunFam Cyclin-dependent kinase 4 1 91 - -
Lele12g1165 207 PANTHER CELL DIVISION PROTEIN KINASE 2 206 - -
Lele12g1165 207 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Lele12g1165 207 Gene3D Phosphorylase Kinase; domain 1 1 88 - -
Lele12g1165 207 Pfam Protein kinase domain 4 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1165 207 SMART serkin_6 4 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1165 207 SUPERFAMILY Protein kinase-like (PK-like) 1 205 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1165 Lele-ChrLele12 18744871 18745494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1165 1 206 Core Cell Cycle Gene Families AT3G54180 63.810 7.33e-92 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele12g1165 Pkinase 2.4e-48 CL0016