Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1158 ATGAAATCTTTTCTTCTCTTCCTCACATTCTCCTTCTTCTGCCAAATATACCTCGTTTTCTCTGCTTCTTCAACTCCACCCCTCCAACTCATCTCTCTGCTTTCACTCAAATCTTCCTTCAAAGACCCTCTAAATACACTTCATGACTGGGACCCTTCTTCCACCTTCTCAAATTCTAATTTCCAGGACCCAGTTTGGTGTTCATGGTCGGGAATCGCATGCCATTCAAAAACAGCTCAAATCACTACCATAGACCTCTCTCATCGCAACCTTTCAGGCACAATTTCACCGGAAATAAGGTATTTGACTACCTTAAACCACTTGAATCTAAGTGGGAATGACTTGAGCGGAAGTTTCCAAGCAGTAGTTTTTGAACTCACTGAGCTGAGGACTCTAGATATCAGCCACAACTCCTTCAACTCAACTTTCCCACCTGGGATTTCGAAGGTCAAGTTCTTGAGGATCTTCAATGCTTACAGCAACAACTTCGTTGGCCCTTTACCTCAAGAATTCATCAGACTCACGTTTCTTGAGCAGCTCAACCTTGGCGGTAGCTACTTCAGCGACAGGATTCCTTCAGCTTACGGCAGTTTCCCAAGATTGAAGGTTCTTCATTTGGCTGGAAATATGTTGGAAGGTCCAATACCACCTCAGTTAGGCTTCTTATCACGGCTTGAACGCTTGGAAATTGGATACAACCAGTTTTCGCGAGGAATACCAGAGGAATTGACTTCTTTGTCTAGTCTAAAATACTTAGATATCTCTTTTGCTAATCTTTCTGGCTCTATGATTCCACAACTAGGAAACTTGACCATGCTGGAAACATTATTGCTGTTCAAGAATCGGTTCACTGGTGAAATCCCGTCAAGTTTAGGAAATTTGAAAGCACTCAGGGCTCTTGATTTGTCAGATAATGAGCTCACTGGGGCTATCCCTGAAGAAGTTGCATTGTTGAAGGAACTTAACATTTTGAGCTTAATGGAGAACAAGCTCACGGGTGAAATACCTCAAGGCATTGGTGAACTTCCCTACCTCGATACTCTGCAACTATTCAACAATTCTCTTACTGGGATTCTTCCGCCTATGCTTGGTTCAAATGGTTTACTCCAGAAACTAGATCTGTCCACCAATTCACTTTCTGGCCCTATCCCACCAAGTGTTTGCAATGGAAACAAGCTCGTGAAGCTCATCCTCTTCCACAACAAATTTGATGGCGCAATTCCAGAATCACTCGTGAACTGTACTTCACTAACAAGGGTTAGAATCCATAACAACCAACTCAACAGTTCAATTCCATCAGGTTTTGGTCTCCTCCCAAACCTGACCTTCGTTGATATGAGCAATAACAACTTTGTAGGTCGAATTCCTGAAGATTTTGGCAATGCAGTTAAAATACAGTACTTGAACCTCTCTGGAAATTCTTTTGAAAGCCGATTACCCAGTAACATATGGAACGCTTCCAATCTACAGATTTTCTCCGCAAGTTCATCAAAAATCATGGGCGAAATCCCAGATTTCGTCGGGTGCCAGAACATCTACAGAATCGAATTGCATGGAAATTCTCTGAATGGCACCATCCCTTGGGACATCGGCCACTGCGAGAAGCTCATTCAATTGAATCTGAGCCACAATTCCCTCACAGGCATAATCCCTTGGGAAATCTCTGCTATTCCATTCATCACGGACGTCGATCTCTCACACAACTTCCTCACTGGCACCATACCTTCCAATTTCAACAATTGCACCACCTTGGAAAACTTCAATGTCAGTTACAACCTCCTCACCGGACCAATTCCCTCGGCGGGATCAACCTTCCACCCATCATCATTCAACGGCAATGAAGGCCTCTGCGGCGGCATTCTGGCGAAACCGTGCGCGGCGGACTCGGAAGCCCTCGCTGCAAGTAGCGAAGTCGAGCTTCACAACAAACAACAGCCCAAGAAAACCGCCGGAGCCATCGTGTGGATCGTCGCGGCAGCGTTCGGAATCGGCCTTTGCGCCCTCGTAGCCGGCACACGCTGTTTTCGTGCAAACTACGGCAGAGGATTCGGCGGCGGCGAAGACCACCGCGAGGTCGGGCCGTGGACCCTGACGGCGTTCCAGCGTTTAAATTTCACGGCGGAGGACGTGATCGAGTGCTTGTCGATGTCCAATAAGATCCTAGGAATGGGGTCCACAGGGACAGTATATAAGGTAGAAATGCCAGGTGGCGAGTTCGTAGCCGTCAAAAAGCTGTGGGGAAAACATAAAGAGAACAGCAACATAATCCGACGGCGGAGAGGGGTCCTAGCGGAAGTTGAAGTGTTGGGGAACGTGAGGCATAGGAACATAGTGAGATTGTTAGGGTGTTGCAGCAACAAGGAGTGCACGATGCTGCTCTACGAGTACATGCCCAATGGAAATTTAGATGATTTATTGTATGGGAAAAATAAAGGAAATAATAATAATCTAGCCGCTGATTGGTTGACGAGACATAAGATCGCCTTGGGCGTGGCTCAAGGGATTTGCTATCTTCACCACGACTGTGACCCAGTGATCGTACACCGCGATCTTAAGCCGAGCAATATATTATTGGACAGTGAGATGGAAGCTAGAGTGGCAGATTTTGGGGTGGCTAAGCTGATTCAGCGTGATGAGTCTATGTCCGTCATTGCTGGATCCTATGGCTACATTGCTCCAGAATATGCTTATACTTTACAAGTAGATGAAAAGAGTGATATCTACAGCTACGGAGTGCTGCTGATGGAGATTTTGACCGGAAAACGATCAGTGGATGCGGAGTTTGGCGATGGGAATAGCATTGTGGATTGGGTTAGATTTAAGATCAAAGCTCAAGGCATTGATTCCATATTTGATAAGAATGTTGGGGCTGAGTGTACATCAGTAAAGGAGGAGATGATACAGATGTTTAGAATCGCATTACTTTGCACTTGTCGAAATCCATCAGATCGACCTTCTATGAGAGATGTTGTGTTGATGCTACAAGAGGCAAGGCCAAAGAGAAAATTGGTCGATAACATAGTAGGCACACAACGTGTCACTCACGATAGTGGCGGCGACCACGATGGCGGTGACAGTGATAATAATATTCCCTTACCATGTCAGAGTTTCTCAGGAAAATTAACCTAG 3129 0.4567 MKSFLLFLTFSFFCQIYLVFSASSTPPLQLISLLSLKSSFKDPLNTLHDWDPSSTFSNSNFQDPVWCSWSGIACHSKTAQITTIDLSHRNLSGTISPEIRYLTTLNHLNLSGNDLSGSFQAVVFELTELRTLDISHNSFNSTFPPGISKVKFLRIFNAYSNNFVGPLPQEFIRLTFLEQLNLGGSYFSDRIPSAYGSFPRLKVLHLAGNMLEGPIPPQLGFLSRLERLEIGYNQFSRGIPEELTSLSSLKYLDISFANLSGSMIPQLGNLTMLETLLLFKNRFTGEIPSSLGNLKALRALDLSDNELTGAIPEEVALLKELNILSLMENKLTGEIPQGIGELPYLDTLQLFNNSLTGILPPMLGSNGLLQKLDLSTNSLSGPIPPSVCNGNKLVKLILFHNKFDGAIPESLVNCTSLTRVRIHNNQLNSSIPSGFGLLPNLTFVDMSNNNFVGRIPEDFGNAVKIQYLNLSGNSFESRLPSNIWNASNLQIFSASSSKIMGEIPDFVGCQNIYRIELHGNSLNGTIPWDIGHCEKLIQLNLSHNSLTGIIPWEISAIPFITDVDLSHNFLTGTIPSNFNNCTTLENFNVSYNLLTGPIPSAGSTFHPSSFNGNEGLCGGILAKPCAADSEALAASSEVELHNKQQPKKTAGAIVWIVAAAFGIGLCALVAGTRCFRANYGRGFGGGEDHREVGPWTLTAFQRLNFTAEDVIECLSMSNKILGMGSTGTVYKVEMPGGEFVAVKKLWGKHKENSNIIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNKECTMLLYEYMPNGNLDDLLYGKNKGNNNNLAADWLTRHKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDSEMEARVADFGVAKLIQRDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVLLMEILTGKRSVDAEFGDGNSIVDWVRFKIKAQGIDSIFDKNVGAECTSVKEEMIQMFRIALLCTCRNPSDRPSMRDVVLMLQEARPKRKLVDNIVGTQRVTHDSGGDHDGGDSDNNIPLPCQSFSGKLT 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1158 1042 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Lele12g1158 1042 SUPERFAMILY RNI-like 84 428 - -
Lele12g1158 1042 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Lele12g1158 1042 Pfam Protein kinase domain 718 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1158 1042 SUPERFAMILY L domain-like 369 600 - -
Lele12g1158 1042 Gene3D Transferase(Phosphotransferase) domain 1 797 1013 - -
Lele12g1158 1042 Pfam Leucine rich repeat N-terminal domain 29 74 IPR013210 -
Lele12g1158 1042 SUPERFAMILY Protein kinase-like (PK-like) 719 994 IPR011009 -
Lele12g1158 1042 Gene3D Phosphorylase Kinase; domain 1 701 796 - -
Lele12g1158 1042 SMART LRR_typ_2 222 246 IPR003591 -
Lele12g1158 1042 SMART LRR_typ_2 438 461 IPR003591 -
Lele12g1158 1042 SMART LRR_typ_2 294 317 IPR003591 -
Lele12g1158 1042 SMART LRR_typ_2 126 150 IPR003591 -
Lele12g1158 1042 SMART LRR_typ_2 318 342 IPR003591 -
Lele12g1158 1042 PANTHER RECEPTOR-LIKE PROTEIN 55 377 996 - -
Lele12g1158 1042 FunFam leucine-rich repeat receptor-like protein kinase TDR 797 1006 - -
Lele12g1158 1042 ProSiteProfiles Protein kinase domain profile. 715 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1158 1042 Gene3D Ribonuclease Inhibitor 262 319 IPR032675 -
Lele12g1158 1042 Gene3D Ribonuclease Inhibitor 30 154 IPR032675 -
Lele12g1158 1042 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 686 796 - -
Lele12g1158 1042 Pfam Leucine Rich Repeat 535 555 IPR001611 GO:0005515
Lele12g1158 1042 SMART serkin_6 715 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1158 1042 FunFam Leucine-rich repeat receptor-like protein kinase 29 191 - -
Lele12g1158 1042 MobiDBLite consensus disorder prediction 1008 1042 - -
Lele12g1158 1042 FunFam Leucine-rich repeat receptor protein kinase EMS1 192 290 - -
Lele12g1158 1042 Gene3D Ribonuclease Inhibitor 159 261 IPR032675 -
Lele12g1158 1042 FunFam Leucine-rich repeat receptor-like protein kinase TDR 315 627 - -
Lele12g1158 1042 Gene3D Ribonuclease Inhibitor 320 633 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1158 Lele-ChrLele12 18701024 18705000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1158 33 1017 Receptor kinase-like Gene Family AT1G08590 42.589 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele12g1158 Pkinase 8.5e-48 CL0016