Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele12g1143 | ATGTATTCGATGAGGGCAAGGTTGGCTTTGGCTGAGAAAGGGATCGAGTATGAGAAAAAGGAACAAAATTTGCTGAACAAAGGGGATGAGCTTCTGCAGAATAACCCGATTCATAAGAAAGTTCCAGTTTTGATCCATAATGGGAAGCCGATCTGTGAGTCTCTGGCGATTGTTCAGTATATTGAAGAAGTTTGGAAGGTCAAAGGCAATGCTTTGCTTCCTTCTGATCCTTATGAAAGAGCTCAAGCCAGGTTCTGGGCTGATTTTGTTGATAAGAAGGTGGCTGAATCTTCGAGTGGAATATGGTTAAAGAAAGGAGAAGCTGTTGAGGCAGCAAAGAAGGACTTCATAGCTGCATTAAAGCAGCTAGAAGAAGTGCTTGGAGACAAGCCATATTTTGGTGGGGATGCGTTTGGATATGTGGACCTTGCTCTCATCCCTTTCTACAGCTGGTTTTATGCATATGAAACACTTGGCAACTTCAAAGTAGAGGAACACTGTCCCAAGTTCATAAAATGGGCAAATGGGTGCATGCAAAGAGAAACTGTGGTCAAGACTCTTCCTGATCCCAAACAGGTCTATGAAGTTGTTTTGATCTTGAGGAAGGCTTTTGGTGTGGACTAA | 624 | 0.4295 | MYSMRARLALAEKGIEYEKKEQNLLNKGDELLQNNPIHKKVPVLIHNGKPICESLAIVQYIEEVWKVKGNALLPSDPYERAQARFWADFVDKKVAESSSGIWLKKGEAVEAAKKDFIAALKQLEEVLGDKPYFGGDAFGYVDLALIPFYSWFYAYETLGNFKVEEHCPKFIKWANGCMQRETVVKTLPDPKQVYEVVLILRKAFGVD | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele12g1143 | 207 | CDD | GST_N_Tau | 1 | 65 | - | - | |
| Lele12g1143 | 207 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 76 | 206 | IPR010987 | - | |
| Lele12g1143 | 207 | CDD | GST_C_Tau | 77 | 200 | IPR045074 | GO:0004364|GO:0006749 | |
| Lele12g1143 | 207 | Gene3D | Glutaredoxin | 1 | 75 | - | - | |
| Lele12g1143 | 207 | SUPERFAMILY | Thioredoxin-like | 2 | 93 | IPR036249 | - | |
| Lele12g1143 | 207 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 69 | IPR004045 | - | |
| Lele12g1143 | 207 | Pfam | Glutathione S-transferase, C-terminal domain | 107 | 173 | - | - | |
| Lele12g1143 | 207 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 1 | 195 | IPR045073 | - | |
| Lele12g1143 | 207 | FunFam | Glutathione S-transferase U20 | 76 | 207 | - | - | |
| Lele12g1143 | 207 | SUPERFAMILY | GST C-terminal domain-like | 68 | 203 | IPR036282 | - | |
| Lele12g1143 | 207 | Gene3D | - | 76 | 207 | - | - | |
| Lele12g1143 | 207 | Pfam | Glutathione S-transferase, N-terminal domain | 2 | 62 | IPR004045 | - | |
| Lele12g1143 | 207 | SFLD | Glutathione Transferase (cytosolic) | 1 | 204 | IPR040079 | - | |
| Lele12g1143 | 207 | SFLD | Main.3: Omega- and Tau-like | 1 | 204 | IPR045073 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele12g1143 | Lele-ChrLele12 | 18582521 | 18584020 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele12g1143 | 1 | 204 | Glutathione S-transferase Gene Family | AT1G78380 | 61.765 | 1.11e-90 | 263 |