LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele12g1136	ATGGACGCCACACACACCATGTTTTGTCGTCAAAACGATTTGATCAACCCTCTGAGCTCAATGGGCATGCAAGTCTCCTGCATTCTCGTCATCTCACACTTCTTCAACGTCGTGCTTAAAACTTTCGGTCAGCCTGGACCCATTGCGCAAATCTTGGCTGGAGTTGTATTAGGGCCAACGGCATTATCTCATGTTAAGCGTATACAAGAATATTTTTTCCTTCAGAGTTCCACAAATTACTATGAAGTTGTGAGCTTCTTCTGCAGAATCTTCATCACATTCTTGTTTGGATTAGAGATGAATACTCAATACATGTTGCTCAACCTACGTTTAGTCAGTTTGGTAGCCTGTGGTAGTGCAGCAGTAGGCGGCATTTTCGGTTTAGGAGTTTCCTTTTATCTGTACAGGCAGTTAACAAACAATGCGCCTTTGCCATACTTTTGTATGATCATTATGCTTGTAGTATCATACACAAGTTCTCCCATAGTGATTCGTTTGGCATCAGAAATGAGGTTGATTGCATCGAACATTGGGCGAATCGCGGTGTCTTCTGCGCTAATCACGGAGATGACTTGCTTGTTATTTTTCAATCTGTTAGTTAACTGGCATACAAAAAGTATTCTGGGTGGATTTGGTTGCCTTGTAATTACTGGGGTCTTGATTCTGATAAACAAGCATTTAGCCTTATGGCTAAATAAAAGACATGCAAACCAAAAGTACTTAAAGGCTCCTCAACTATTACTCATCCTATTCCTTCTTGTAGGGAACTCAGTGATTATAGAAATTTGGGGTTTCAATAGTATAATCAGTTGCTTTTTAGTTGGCTTGATGTTTCCAAGGGAAGGTAAAACTGCTAGAACATTGATACATAAACTCGGTTATTCTATTTACAACTTTATACTTCCAGTGTACTTTGGCTACTTAGGCTTTCAATGTAACCTCATTGCCTTGAGAAACCTGAATGATGTAACCAATGTTGCCATATTAATCTTATTGAGCATTGGAAGTAAGCTTAGTGGAACTCTTCTGGCTTGTCGTTACCTTCAAATTCCTCCGAGTGAAGGTATTTTTCTTGGCTTCATATTGAACACCAGAGGGTATGCTGATCTTCTATTTTTTGGGGCAGCTGCAAAGGGAATAATTAGTTTTTCTGCAGAAGCTTACAATGTGTTGTTAGTATCAATAGTGCTTAACACAATTATATCAGGAATAATTGTTGCTTCTCTGGCCAGAGCTGATGATAAAATGTTTTCAAACCAACATACAACTCTTGAATCGCGACAAGTGGAGGACGAGCTTCGAATTCTAGCTTGCATGTATGATCCTCGTCAAGTATCCGCTGTACTAGCATTGGTTTTGGCGATAAATGGCGCTAGAACATCACCGGCTACCGTTTACTCAATGCACCTAATAGAGCTTGTAAAGAAGATCAAGTCAAATATGTTATACCACCAAAAAGAAAATGCTGAGCTTAGTGATGATGATGACTATGGTGGGAATGATGTAGTGGAAATTAATGAAACTATTGACAACTTCACTACTCAGACAAAGATTTTGATCCACCAAAGGAAGGCAGTATCTTCTTTCCCAAGTCTGTATGAAGATGTCTGCAATGATGCAGAGGATTTACATGTAACTATCATTTTGCTTCCTTTTCACAAACACCAACGTATTGATGGAAAATTGGAAAGCGGGAAGGAAGGCATAAGGACGACGAATCAGAAGGTTCTCAGACACGCCCCTTGTTCGGTTGGTATCATTGTAGAAAGAGGACTGAGTAGGGTTCCTGGCTTTCCCCAACTAACTGCCTCTGAAGGCATACAAAATGTTGCAACACTTTTCTTCGGAGGTTCAGATGATCGCGAGGCCATTGCTTGGAGCATACGCATGGCGCAACACTCCAAAATCAACTTAACCATCATCCGGTTCCTACTCGCTTCTATGCCACAAAGCGAGACATCCACTGAAGAATCAGAAGACAAAGAAATTCTCATGTCATTGTCGGGACAAGAAACTGTGAACGAGGTTGATAATACCTTTATGGTCGATTTCTACAACCGATTCGTGGCATCAGGTCAGGTCGGATATGTGGAGAAGTTTGTGAGCAACGGAGCACAAACAGTTCAAGTTTTCAGAGAATTAGGGGATATGTATTCTTTGTTCATAGTAGGAAAGGGTGGAAGAGGACATTGTTCATTGACAATTGGTATGAGTGATTGGGAGGAGTGTCCAGAACTTGGAACAGTTGGGGATATCTTGGCTTCTTCAGAATTGGCCATCCATGGGTCAGTTTTGGTTGTACAACAGCATAGGGATGTGAAGAAAAACCTGATGAATGATTGA	2343	0.408	MDATHTMFCRQNDLINPLSSMGMQVSCILVISHFFNVVLKTFGQPGPIAQILAGVVLGPTALSHVKRIQEYFFLQSSTNYYEVVSFFCRIFITFLFGLEMNTQYMLLNLRLVSLVACGSAAVGGIFGLGVSFYLYRQLTNNAPLPYFCMIIMLVVSYTSSPIVIRLASEMRLIASNIGRIAVSSALITEMTCLLFFNLLVNWHTKSILGGFGCLVITGVLILINKHLALWLNKRHANQKYLKAPQLLLILFLLVGNSVIIEIWGFNSIISCFLVGLMFPREGKTARTLIHKLGYSIYNFILPVYFGYLGFQCNLIALRNLNDVTNVAILILLSIGSKLSGTLLACRYLQIPPSEGIFLGFILNTRGYADLLFFGAAAKGIISFSAEAYNVLLVSIVLNTIISGIIVASLARADDKMFSNQHTTLESRQVEDELRILACMYDPRQVSAVLALVLAINGARTSPATVYSMHLIELVKKIKSNMLYHQKENAELSDDDDYGGNDVVEINETIDNFTTQTKILIHQRKAVSSFPSLYEDVCNDAEDLHVTIILLPFHKHQRIDGKLESGKEGIRTTNQKVLRHAPCSVGIIVERGLSRVPGFPQLTASEGIQNVATLFFGGSDDREAIAWSIRMAQHSKINLTIIRFLLASMPQSETSTEESEDKEILMSLSGQETVNEVDNTFMVDFYNRFVASGQVGYVEKFVSNGAQTVQVFRELGDMYSLFIVGKGGRGHCSLTIGMSDWEECPELGTVGDILASSELAIHGSVLVVQQHRDVKKNLMND	780

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele12g1136	780	Gene3D	-	20	417	IPR038770	-
	Lele12g1136	780	Pfam	Sodium/hydrogen exchanger family	28	410	IPR006153	GO:0006812\|GO:0015299\|GO:0016020\|GO:0055085
	Lele12g1136	780	PANTHER	CATION/H + ANTIPORTER	12	771	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele12g1136	Lele-ChrLele12	18554834	18557517	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele12g1136	7	772	Antiporter Super Family	AT1G16380	41.154	0.0	591