Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1134 ATGGGTAGGAAATGCTTTCTCGCTCTTGATGAAGTATGGGATGAGAATCATGGAATTTGGAAGGTTTTCCTAGCTCTTTTGAAACATGTAGCATTACGAACTAAGATTCTTAGCACAACCGAAGACATTGCTACTGAGATGAAACTGAGAGAGTCAGAAATATTTGCAGAAGAGGAAGATGGAGAGAGAGAGTTTGGTGGAGGAGGAGCACACATAAAGAAGGGACCATGGAGTGCTGAAGAAGATGAGATTCTCATGAAACATGTCAAGAAAAACGGTCCAAGGGATTGGAGCTCCATTCGATCCAAAGGCTTGCTTCCCCGCACCGGGAAATCATGCCGACTCCGATGGGTTAACAAGCTTAGACCCAACTTGAAGACAGGGTGCAAGTTTTCAGCAGAGGAAGAAAGAGCAGTGATAGAATTGCAGGCAGAGTTTGGGAACAAGTGGGCGAAAATAGCGACGTACTTGGAAGGAAGAACAGACAACGATGTGAAGAATTTCTGGAGCAGTCGGAGAAAGAGGTTGGAGAGAATGTTGCAGAAACCTTCTCCATCATCATCATCATCATCATCAAAGCCACACAATAAGAACAAAGCAACAATATCTCATATAATTCATCACCCACCACCACCTGTAGTTGAAGAGGTTCCTGCTTCATGCAGTTCAAATCATGTAGAGCAAAACCAATCAGGCGACAACAAGTTTCAGATGGTTGATGACACTGAGGAGTTGAAGGTGATGAATAATGTGAAAGCAGAGGAGGCTACTCCACTTCACATGGTTCCGTCATTTGAGTCTTCTTCATCAGAGTACACCTTTTCTCAAGTTCTTCCTGATGAGTCCCACCAAGTGGACTACGGCGGCCTCTTGCCGCCTCCGGTCTACCATGGCCTGGTCGATCCGGAGCCTTTCGATGCCACCTTGCTCGAAGTTTTTGAGCAGCACAAGAGGCCAGGTCTTACAATGGGAGGGATTTCTCAGAGTTCAATTCCAGCAAATGGCTTCTTTGAGGACTTCCCAAGTGACATACTTGACTACTTTGAAGACCTTCCTAACTCATTAGACAAATGA 1074 0.4525 MGRKCFLALDEVWDENHGIWKVFLALLKHVALRTKILSTTEDIATEMKLRESEIFAEEEDGEREFGGGGAHIKKGPWSAEEDEILMKHVKKNGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAEEERAVIELQAEFGNKWAKIATYLEGRTDNDVKNFWSSRRKRLERMLQKPSPSSSSSSSKPHNKNKATISHIIHHPPPPVVEEVPASCSSNHVEQNQSGDNKFQMVDDTEELKVMNNVKAEEATPLHMVPSFESSSSEYTFSQVLPDESHQVDYGGLLPPPVYHGLVDPEPFDATLLEVFEQHKRPGLTMGGISQSSIPANGFFEDFPSDILDYFEDLPNSLDK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1134 357 CDD SANT 130 169 IPR001005 -
Lele12g1134 357 Gene3D - 129 204 - -
Lele12g1134 357 PANTHER TRANSCRIPTION FACTOR DUO1 68 354 - -
Lele12g1134 357 Pfam Myb-like DNA-binding domain 130 170 IPR001005 -
Lele12g1134 357 Gene3D - 69 127 - -
Lele12g1134 357 FunFam Transcription factor GAMYB 129 202 - -
Lele12g1134 357 MobiDBLite consensus disorder prediction 181 198 - -
Lele12g1134 357 ProSiteProfiles Myb-like domain profile. 130 173 IPR001005 -
Lele12g1134 357 ProSiteProfiles Myb-like domain profile. 69 121 IPR001005 -
Lele12g1134 357 MobiDBLite consensus disorder prediction 176 198 - -
Lele12g1134 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 177 IPR017930 -
Lele12g1134 357 FunFam MYB transcription factor 74 126 - -
Lele12g1134 357 Pfam Myb-like DNA-binding domain 77 127 - -
Lele12g1134 357 CDD SANT 76 121 IPR001005 -
Lele12g1134 357 SUPERFAMILY Homeodomain-like 72 169 IPR009057 -
Lele12g1134 357 SMART sant 73 123 IPR001005 -
Lele12g1134 357 SMART sant 127 175 IPR001005 -
Lele12g1134 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 125 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1134 Lele-ChrLele12 18542345 18548218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1134 63 353 MYB Transcription Factor Family AT3G60460 43.421 5.07e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele12g1134 Myb_DNA-bind_6 7.9e-12 CL0123