Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1132 ATGGCAACTTGGTGTCCAAGTTGCTTCAAGTTCACACCAAGTTCTTTTCTTCTACACTCCTCTCTCGTACCTTACCTCTTCAGTGTCCGTTCTAGTTCTGTGAGGCCTGTTAATATCCGTTGTTTCTATAAGCGTCAAAGACTTTGGCTTCGATCAAGCCGTCGTTGTGGTCCTCTGCTAGTTACGTCTTGCAGCAATTTTGAGTCTGTAGAACTGCAAGAAGCTCAGAATGCTGTTTCAAAACTTCTTCAAGAATTCGGGGTGTCTGAGGAGGAATCTAATTCTATTGCGTCTAATTCACCAAAGTATTTGAGGATGCTGGTTGATGAAGTTCGGGAAAAGGACGAACTTTCAATGTGGGAGAAGCAGATTGATGGGTTCCAGGAGAAAGTGGTTCACATTGCTAGGGAGAAAGGTGATAATGGCAAAGTTGCATACTTGGAGAGTCTCGGTTTGAGCCTTTCTTCAGCTATGAATGTGGCCAGATATCTGTCTGCAGAAACACTTGCAACACTCATTCTTAAGGTTAAGTGTATGAAGGAATTGTTCTTTTCTGGCAGTGAAAGTTATGAGTTCCCAGTGAGAAGAGTTCGCAATATGATGATGCAGATATCAATTCATATTGATGAAGATCTGCAGCAGACTTTGGCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTAAACATGTTGAATTCCAGTGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCCGTGTACTGTTGTTATCAGGAAAGTTTCACATGAAACCGTTAGTGGAGTTTCTTGAGAGTGTTGGAATCCAAAGAGGTCTCATCAGAAATATACTGTTGACTTTTCCTCCCTTTTTGCTGTGGAATATTGAAGTATTTAAAACTCGAGTGCTAGCCTTGAAAGAGATTGGTGGTGTAAAGGACAATTATGCCAAGTTACTGCTAAAGTATCCATGGATACTATCTAAAAGCATTCAAGACAATTATCAGGAGGTCCTCTCTTTGTTTGATTCAGAGAAGGTTCCCAAGGCATTCGTTGATCGCGCAATCAAAAGCTGGCCCCATATACTGGGTTGTTCATCTAGCAAGCTAAAGCTGATGGTTGATCAGTTTGGTGAAATAGGAGTTCAATACAAGAAGTTGGGTCAAGTTATTGCTAAAAGTCCTCAGCTACTGTTACAGAAGCCGCAAGACTTTCTCCAGGTAGTTCTGTTCTTTGAAAATATGGGGTTTGATAGACAAACAATCGGGACAATACTGGCTCGTTGCCCTGAAATCTTTGCTGCTTGCCCTACCAAGACTCTCAAGAGAAAGATTGAGTTCCTACATGGTATTGGTGTTTCTGAAATTCACCTTCCTCGGGTTATAAAAAAGTATCCAGAACTTCTTGTGTCCGACCCAGACAGAACTATGCTACCTAGGTTGATGTACTTGATGAAGTTAGGACTATCTGAAAGAGACGTTGCATTCATGGTACGATCATTTTCTCCTCTGCTTGGATACAGCATTGAGGAGGTTCTGAGACCCAAAGTAGAATTCCTGGTGAACACAATGGAGAGGCCAGTGAGGGACGTGGTGGGGTACCCCAGGTATTTTAGCTATTCTTTAGAGAACAAGATAAAGCCAAGATTTTGGGTTCTCAAGGGAAGGAATATTGAGTGTAGTTTGAAGGATATGCTGGCAAAAAATGACGAAGAATTTGCTGCTGAATATATGAATATCCCGTCGTCAACTCATTCTTGA 1743 0.4148 MATWCPSCFKFTPSSFLLHSSLVPYLFSVRSSSVRPVNIRCFYKRQRLWLRSSRRCGPLLVTSCSNFESVELQEAQNAVSKLLQEFGVSEEESNSIASNSPKYLRMLVDEVREKDELSMWEKQIDGFQEKVVHIAREKGDNGKVAYLESLGLSLSSAMNVARYLSAETLATLILKVKCMKELFFSGSESYEFPVRRVRNMMMQISIHIDEDLQQTLAFFEKVEARRGGLNMLNSSDAAFDFLIESFPRVLLLSGKFHMKPLVEFLESVGIQRGLIRNILLTFPPFLLWNIEVFKTRVLALKEIGGVKDNYAKLLLKYPWILSKSIQDNYQEVLSLFDSEKVPKAFVDRAIKSWPHILGCSSSKLKLMVDQFGEIGVQYKKLGQVIAKSPQLLLQKPQDFLQVVLFFENMGFDRQTIGTILARCPEIFAACPTKTLKRKIEFLHGIGVSEIHLPRVIKKYPELLVSDPDRTMLPRLMYLMKLGLSERDVAFMVRSFSPLLGYSIEEVLRPKVEFLVNTMERPVRDVVGYPRYFSYSLENKIKPRFWVLKGRNIECSLKDMLAKNDEEFAAEYMNIPSSTHS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1132 580 Pfam mTERF 262 568 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 Pfam mTERF 75 295 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 SMART mt_12 276 306 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 SMART mt_12 489 521 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 SMART mt_12 522 553 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 SMART mt_12 382 412 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 PANTHER CGI-12 PROTEIN-RELATED 144 366 IPR003690 GO:0003690|GO:0006355
Lele12g1132 580 Coils Coil 72 92 - -
Lele12g1132 580 FunFam Mitochondrial transcription termination factor family protein 362 575 - -
Lele12g1132 580 Gene3D Transcription termination factor 3, mitochondrial 362 579 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1132 Lele-ChrLele12 18534608 18538631 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele12g1132 mTERF 8.4e-97 No_clan