Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1129 ATGATGGACAAAATCCGTGGCAAAGGAGACGAATTAAAGAGGTCTCCATCCCAGCATTCGTCATCTTCAGCAGTTGCATTAGCCATCAAGGGTAACAAGAAAAGCAAGCGTATGGTACAGTGGGCACTGGATAAATTTGTTCCTGAGGGAAGAATTATTAAACTGAAGGGTTTATCAGCGAAAATCTCGTTATGCGCTCCAAGATTTTGTACAGTTTATTCTGTTTCCAAAGGGGAACTGTTTTCTTCACGGCCATCAGACATTGAGATTGATGGAAGCTTAGTAGATGACAGCAGTGAAACCAGTTGTTCACCCAATAGCTCATTGAACTCTGCATCCACCTCTCATATTGACTATGGCTCGGTTGGATCGTATGCTCTTATGCATTCCTCTTCCCTAGCTGCGCAGAGATATAAAGGTCTTTCAACCATTAATCAGACACGTCAGAGCACAAAATCTAGTTTAACTGAAAATAACCACTCTAGAAGCCATTCTCTAGATCTTGGCATAGAGCAAACTGCTATAAGTTCTTCTACCCGAAACTCAGATATTGACTATTCTTTGAGCCGGCCCTCTAGCTGCAAAAGCAACCTAGCAGATGGTGAATCTTGGAATTATTATCCAAATCTCACCATGGATGCGCCGTCGGCAACTGTTTCGCCGGATAAACAGGTAAATTTGAACCCTGAGCTGGAAAAGTTGAGGATTGAACTAAAGCATGCCCAAGGAATGCACATGGTAGCTCAAAGACAGAGTATTTATGCATTACAAATGGAGGACATAGCCAAAAAGTTAATAAGAAAGGAGAGAGAGAAATATGAGGCAGCAGAAAGAGAAGCTGCTCATTTGAAAAGAAGTGCAGAAGAGGAAGCTATGGAAAGAATAGAAACCGAGAAGAAAGCCGTCGAAGCCGCCAAAAGGAATGAAGATCTAGAGGATGCTCTTAGTGGTTCCATGCCTCAGTATAAGAAGTTTAAATGGGATGAAATAGTTTCAGCTACTTCATCATTCTCTGAAGAGCTTAGAATTGGTAAGGGAGCTTGTGGAACAGTTTACAAGTGCAATTTGTATCATAAACCTGTGGCTGTGAAAATTCTCCACTCTAACGAAGACCACATTATCAAACAACTCCAACAAGAGCTTGAAATACTGAGCAGAATTCGTCATCCGAATTTACTTCTGCTTCTTGGGGCATGCCCTGATCATGGATGCATTGTGTATGAATACATGGAGAATGGTAGCTTAGAGGACAATTTACTCCAAAATAAAAGTGACATCTCAATTCCATGGTTCAAGAGGTACAACATTGCATGGGAAGTAGCCTCAGTTCTTGCCTTTCTTCATAGCTCGAAGCCGAAGCCGATCATCCATCGTGATTTGAAACCGGCAAACATCTTACTAGATCGAAATCTCGTGAGCAAGGTTGGTGATATTGGTCTTTCTACATTACTCCATTCCGATACATTATCTACAATGTTCAATGACACAGAACCTGTTGGGACACTCTCCTACATTGATCCTGAGTACCAAAGGACAGGGCTAATATCTCCCAAATCTGATGTTTATGCTCTTGGAATGGTGATCCTGCAATTAAATGTTGGACCTAAGGCAGGGAATTGGCCACTTCATGAGACTTTGGAGTTAGCTCGATTAGGACTAAGCTGCACAGAACTTCGGCGTAGAGACCGGCCTGATTTGAAAGATCATGTTCTTCCCATGCTGGAGAGATTAAAAGAAGTTGCTGATAGGGCTCAACAACATTCTGCTGCAATTGTTACTGTTAAATCTAAACCTCCTAATCACTTTATCTGCCCAATACTTCAGGATGTGATGGAGAATCCTTGTATTGCTGCCGATGGTTATACTTATGATTACAAAGCAATTGAAACATGGCTGCAAACCAATGAAAAATCACCAACGACAAATACGGCATTACCTCATAAGAATCTGATTCCCAATTACACGCTTCTATCTGCTATTGTGGAAAATTTCCATTTCGTCACAGAACAAAAAAGCATCTTCAGTGACTCCATTCACAATGCATCAGATTGGGAACTCAAGTGA 2064 0.4147 MMDKIRGKGDELKRSPSQHSSSSAVALAIKGNKKSKRMVQWALDKFVPEGRIIKLKGLSAKISLCAPRFCTVYSVSKGELFSSRPSDIEIDGSLVDDSSETSCSPNSSLNSASTSHIDYGSVGSYALMHSSSLAAQRYKGLSTINQTRQSTKSSLTENNHSRSHSLDLGIEQTAISSSTRNSDIDYSLSRPSSCKSNLADGESWNYYPNLTMDAPSATVSPDKQVNLNPELEKLRIELKHAQGMHMVAQRQSIYALQMEDIAKKLIRKEREKYEAAEREAAHLKRSAEEEAMERIETEKKAVEAAKRNEDLEDALSGSMPQYKKFKWDEIVSATSSFSEELRIGKGACGTVYKCNLYHKPVAVKILHSNEDHIIKQLQQELEILSRIRHPNLLLLLGACPDHGCIVYEYMENGSLEDNLLQNKSDISIPWFKRYNIAWEVASVLAFLHSSKPKPIIHRDLKPANILLDRNLVSKVGDIGLSTLLHSDTLSTMFNDTEPVGTLSYIDPEYQRTGLISPKSDVYALGMVILQLNVGPKAGNWPLHETLELARLGLSCTELRRRDRPDLKDHVLPMLERLKEVADRAQQHSAAIVTVKSKPPNHFICPILQDVMENPCIAADGYTYDYKAIETWLQTNEKSPTTNTALPHKNLIPNYTLLSAIVENFHFVTEQKSIFSDSIHNASDWELK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1129 687 Pfam Protein kinase domain 339 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1129 687 SUPERFAMILY Protein kinase-like (PK-like) 319 568 IPR011009 -
Lele12g1129 687 MobiDBLite consensus disorder prediction 1 25 - -
Lele12g1129 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Lele12g1129 687 MobiDBLite consensus disorder prediction 1 15 - -
Lele12g1129 687 ProSiteProfiles Protein kinase domain profile. 337 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1129 687 Pfam U-box domain 599 660 IPR003613 GO:0004842|GO:0016567
Lele12g1129 687 Gene3D Transferase(Phosphotransferase) domain 1 318 599 - -
Lele12g1129 687 Coils Coil 259 314 - -
Lele12g1129 687 MobiDBLite consensus disorder prediction 145 170 - -
Lele12g1129 687 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 600 670 IPR013083 -
Lele12g1129 687 SUPERFAMILY RING/U-box 596 661 - -
Lele12g1129 687 Coils Coil 231 251 - -
Lele12g1129 687 ProSiteProfiles U-box domain profile. 597 670 IPR003613 GO:0004842|GO:0016567
Lele12g1129 687 MobiDBLite consensus disorder prediction 95 112 - -
Lele12g1129 687 SMART Ubox_2 601 663 IPR003613 GO:0004842|GO:0016567
Lele12g1129 687 SMART serkin_6 337 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1129 687 PANTHER OS02G0152300 PROTEIN 59 661 - -
Lele12g1129 687 MobiDBLite consensus disorder prediction 92 112 - -
Lele12g1129 687 CDD RING-Ubox_WDSUB1_like 602 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1129 Lele-ChrLele12 18519349 18525274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1129 62 662 U-box Gene Family AT4G25160 45.129 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele12g1129 Pkinase 2.5e-37 CL0016