Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1128 ATGAGCCACATTGTTATATTTCTTCTTGGACTATCTTTCGCTGCATTATTTTCAATTCTTGTTCTTTATATCTTCTTTTACCGCAAAAGAAGAACAACCCATGATGAGATCAAAGACATAGAAAGCCCAGGATTCAAGCATGAAGATACAGTGCAGAAAGAGGACTTGGTGATCTTCCAAGGAGGTGAGAACCTCACAATATGTGACATTCTTGATGCTCCAGGGGAAGTAATTGGAAAATCCAATTATAGCACACTTTATAAGGCCTTGTTGCAGAGGTGCAATGCAGTGAGGCTTCTGAGATTTTTGAGGCCAGTATGCACTACAAGGGATGAAGAATTGGTTGATGTGATTGGAATGATTGGAGGGATAAGGCATCCCAATTTGGTTCCTCTTGTTGGATTTTACACAGGGCCAAGGGGTGAAAAGCTTCTTGTTCATCCCTTTTATGGTCATGGGAATCTTACTCAGTTCATCAGAGATGGAAATGGCGAGTGTTACCACTGGGCTACGGTATATCGACTAACCTTTGGTATAGCCAAAGGACTAGAGCATCTTCATACTGTACTTGAGAAGCCTATGGTCCATGGTAACCTCAAGTCGAAAAACATCCTTTTAGATCGCAATTACCAGCCATACATCTCGGATTTTGGCCTGCACCTCCTCATGAATCCTACTGCCGGCCAAGAAATGCTTGAAGCATCGGTTGCTCAGGGTTACAAGGCCCCTGAACTGATTAAAATGAAGGATGTTAGTGAAGAGACCGATATATATAGCCTCGGCGTGATCATGCTTGAGTTGCTTTCGAGGAAGGAGCCTATCAATGAGCATCCGACCCCTGATGAGGATTTCTATTTGCCAAATTTCATGAGAACTGCCGTGCTCGGACATAGAATATCCGACTTGTACCATCCAGACATTCTTCTCGGCAAAAGCAGGGACAATGGTGGCCCGGTGAGCGAAGAATGCATCCTCAAGTATTTTCAACTTGCTATGTCTTGTTGTTCTCCTTCTCCTTCATTGAGACCAAACATAAAGCAAGTCCTTTGGAGGCTTGAAGAGATTATCAAGTAA 1074 0.432 MSHIVIFLLGLSFAALFSILVLYIFFYRKRRTTHDEIKDIESPGFKHEDTVQKEDLVIFQGGENLTICDILDAPGEVIGKSNYSTLYKALLQRCNAVRLLRFLRPVCTTRDEELVDVIGMIGGIRHPNLVPLVGFYTGPRGEKLLVHPFYGHGNLTQFIRDGNGECYHWATVYRLTFGIAKGLEHLHTVLEKPMVHGNLKSKNILLDRNYQPYISDFGLHLLMNPTAGQEMLEASVAQGYKAPELIKMKDVSEETDIYSLGVIMLELLSRKEPINEHPTPDEDFYLPNFMRTAVLGHRISDLYHPDILLGKSRDNGGPVSEECILKYFQLAMSCCSPSPSLRPNIKQVLWRLEEIIK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1128 357 Pfam Protein tyrosine and serine/threonine kinase 76 349 IPR001245 GO:0004672|GO:0006468
Lele12g1128 357 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 45 355 - -
Lele12g1128 357 Gene3D Transferase(Phosphotransferase) domain 1 151 357 - -
Lele12g1128 357 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1128 357 Gene3D Phosphorylase Kinase; domain 1 73 149 - -
Lele12g1128 357 SUPERFAMILY Protein kinase-like (PK-like) 75 354 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1128 Lele-ChrLele12 18508363 18510317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1128 28 357 Carbohydrate Esterase AT5G61570 57.692 3.80e-135 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele12g1128 PK_Tyr_Ser-Thr 3.6e-29 CL0016