Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1119 ATGGGGAAAAAAAATCGATCCTCAAAAGTCAAATTCCTTCCCTTTGTACCTGCTTTCTCCGATCTAGCTGAATCAAAGTCAAATACTGGCATGGACTCGAACAGTGAAGCTGGAAACTCCTTACATTTCGACCCAGCTTTGAAATCATCGTCTCGAAGAAGCATCACCTCGAGTCACTCCAGGGGATCCGACAGGATTTCGGTTCGGGAAGTGACTTTCAATCATTCAGGATCCAAGCCCGTTCGGTACGGGTCAAAAGGCGCTGATTCCGAAGTATTCAGCCTGTCGCAGAAGGAAATCAGCGACGAGGATGCGAGATTGGTTTATATAAACGATCCTGTAAGAACAAACGAGAGGTTCGAATTCGCAGGAAATTCTATTCGTACAGGGAAATACTCCATCATCACTTTTTTGCCCAAGAATTTGTTCGAACAATTTCATAGAGTTGCATATATTTATTTCCTTGTAATTGCCGTTCTTAATCAGCTTCCTCAGCTCTCTGTTTTTGGTAGGGGAATTTCCGTTTTGCCTTTAGCATTTGTTCTGCTCGTTACAGCAGTGAAGGATGCGTTCGAGGATTGGAGAAGACATCGATCAGATAAAGTCGAGAACAGCAGATTAGCGTCAGTTTTAGTTGGTGATCAATTTGAAAAGAAGAAATGGAAGGATATTAGAGTTGGTGAAATTGTTAAAATTCATGCTAATGGAACAATCCCTTGTGATATTGTGTTGCTATCAACCAGTGATCCAACTGGGGTTGCATACGTGCAGACTATAAATTTAGATGGAGAATCGAATTTGAAGACTCGATATGCAAAGCAAGAGACGATTTCAAAGCAGCCTGAAACAGACAGAATCAATGGTTTGATTAAGTGTGAAAAACCCAATAGAAACATATATGGGTTTCAAGGTACTATGGAAGTTGATGATAAACGTTTGTCACTTGGATTCTCGAATATTGTTCTTAGAGGCTGTGAGCTCAAGAACACTAAATGGGCACTTGGTGTTGCTGTATATTGTGGCAGTGAGACCAAAGCTATGCTCAACAGCTCAGGAGCTCCATCTAAGAGGAGCCGGCTCGAGACTCGAATGAACTCCGAGATAATCATTCTCTCTTTCTTTCTTGTTGCTTTGTGTACAGTCACCTCTGTTTGTGCTGCTGTTTGGTTAAAGCGCAGAGAGGCTGAGTTGGATATTTTGCCTTATTATAGGAAGTGGAACTTTTCAAAGGGCGAGAAATATAAGTATTATGGATTGGGATTGGAAATTGTTTTCACATTCCTCAGTTCTGTTATAGTGTTCCAGGTCATGATTCCCATATCATTGTACATTTCCATGGAGCTTGTTCGCATTGGTCAGGCCTACTTCATGATCCGAGACAACCGCATGTATGATGAGGCATCAAATTCCAGATTTCAGTGCAGGGCTTTAAATATCAATGAAGATTTAGGGCAAATCAAGTATGTTTTCTCAGACAAAACTGGCACACTTACTGAGAACAAGATGGAGTTTCAATATGCTAGCATCTGGGGTGTTGATTATAGTAAAACAGATGAAAGTCAGGAGAATGAGCAAGTTGAATACTCTGTTGAAGTGTTGAGGCCCAAGATGAATGTGAAAGTAAATCCAGAACTTTTGCAGTTATCTAGAAGTAGCCTTGAAAACAACAAAGGAAAAAGAATCCATGACTTCTTCCTAGCATTGGCAGCCTGCAATACCATTGTTCCTCTTCATGTTGACACATCTGATTCTAGCGTCAAGTTGATAGATTATCAAGGGGAGTCACCAGATGAACAAGCACTGGCATATGCGGCTGCTGCCTATGGTTATACACTTATAGAACGGACCTCAGGTTACATAATTATCGATATTCAGGGGGAGAGACAAAGGTTCAATGTCTTGGGCTTGCATGAATTTGACAGTGATAGGAAGAGAATGTCAGTCATATTGGGGTATCCTGACGATTCGGTTAAACTTTTCATCAAGGGTGCCGATACATCCATGTTAAGTGTAATAGACAAGTCATCAAACATGGACATAATACATGCAACTGAAAGCCATCTTCACTCTTACTCTTCTCTGGGGTTAAGGACTCTTGTCATTGGAATGAGGGAACTGAATACTTCAGAATTCGAGCAATGGCACCGAGCCTTTGAGACAGCGAATGCTGCTTTGATGGGTCGGGCTGCTTTACTTCGTACAGTTGCTAGCAATATCGAAAACAACCTCTGCATATTGGGTGCATCTGCTATTGAAGATAAATTGCAGAAAGGGGTGCCAGGATCCATTGAGTCTCTAAGGACTGGAGGTATTCAGCTATGGGTATTGACTGGGGACAAACAGGAAACTGCCATATCAATTGGCTACTCCTCAAAGATCCTAACAAGTGAGATGAATCAGATTATAATTAATAGCAAAAATAAAGAGTCCTGTAGAAGGAAATTACAAGATGGGCTTGTCATGTTCCAAAAACTCATGGCTTCTACTGGTGTTACCAATGGTACTGAAACTTCTTACACTCCTAGAATTCCAATAGCCTTGATCATCGATGGTACCAGCCTCGTACATGTTCTTGATAGTGAACTCGAAGAACAGCTCTTTCAACTAGCAAGCAAATGTTCGGTGGTTCTCTGTTGTCGTGTGGCTCCATTGCAAAAGGCTGGGATCGTTGCCCTTGTGAAAAAGAGGACGTCTGACATGACACTTGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAGGAAGGTCGGCAAGCTGTAATGGCATCTGATTTTGCGATGGGGCAGTTTAGGTTTTTAGTTCCCCTCTTGTTGGTGCATGGACACTGGAATTACCAACGTTTGGGTTATATGATACTGTACAATTTTTACAGAAACGCCGTCCTTGTTATGGTCTTATTTTGGTATGTACTCTTCACTGCCTTCTCTTTGACGACAGCTATAAATGAATGGAGCAGCATGTTGTACTCAATAATTTACACTTCATTGCCAACAATTGTTGTTGGTATTCTTGACAAAGACCTTAGTAAAAGGACTCTTATAAATCATCCTCAGCTTTATTGGGCTGGGCAGAGACACGAGGCATACAACAAAAAATTATTTTGGTTTACAGTGTTTGACACATTGTGGCAAAGCATTGTTGTCTTCTTCGGAGCTTTCTTCGCGTATTGGGGAAGCACTATCGATGTAGCAAGCATTGGAGATCTCTGGACTCTTGCAGTGGTTATTTTAGTTAACATGCACTTGGCCATGGATGTTATCAGGTGGAATTGGGTCACTCATGTTTCCATTTGGGGTTCTATAGTTGCAACTTTCATCTCCGTCATGGTCATTGATACTATTCCTACATTTCCTGGTTACTGGGCCATCTTTCATGCGTTAGGCACTGGATCCTTTTGGCTATGTCTGCTTGGAATCATCATCACAGCATTGCTTCCTCGTTTCGTGGTGAAGTATATTCATCAATATTACTTCCCAGATGATATCCAGATTTCAAGAGAAGCTGAGAAGGTTGGAACTTCAAGGGTGGTTGGTGGTGGAGATATAGAAATGCATCCCATTCCAGTTGGTCCACCAAGATGA 3618 0.4174 MGKKNRSSKVKFLPFVPAFSDLAESKSNTGMDSNSEAGNSLHFDPALKSSSRRSITSSHSRGSDRISVREVTFNHSGSKPVRYGSKGADSEVFSLSQKEISDEDARLVYINDPVRTNERFEFAGNSIRTGKYSIITFLPKNLFEQFHRVAYIYFLVIAVLNQLPQLSVFGRGISVLPLAFVLLVTAVKDAFEDWRRHRSDKVENSRLASVLVGDQFEKKKWKDIRVGEIVKIHANGTIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETISKQPETDRINGLIKCEKPNRNIYGFQGTMEVDDKRLSLGFSNIVLRGCELKNTKWALGVAVYCGSETKAMLNSSGAPSKRSRLETRMNSEIIILSFFLVALCTVTSVCAAVWLKRREAELDILPYYRKWNFSKGEKYKYYGLGLEIVFTFLSSVIVFQVMIPISLYISMELVRIGQAYFMIRDNRMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQYASIWGVDYSKTDESQENEQVEYSVEVLRPKMNVKVNPELLQLSRSSLENNKGKRIHDFFLALAACNTIVPLHVDTSDSSVKLIDYQGESPDEQALAYAAAAYGYTLIERTSGYIIIDIQGERQRFNVLGLHEFDSDRKRMSVILGYPDDSVKLFIKGADTSMLSVIDKSSNMDIIHATESHLHSYSSLGLRTLVIGMRELNTSEFEQWHRAFETANAALMGRAALLRTVASNIENNLCILGASAIEDKLQKGVPGSIESLRTGGIQLWVLTGDKQETAISIGYSSKILTSEMNQIIINSKNKESCRRKLQDGLVMFQKLMASTGVTNGTETSYTPRIPIALIIDGTSLVHVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRLGYMILYNFYRNAVLVMVLFWYVLFTAFSLTTAINEWSSMLYSIIYTSLPTIVVGILDKDLSKRTLINHPQLYWAGQRHEAYNKKLFWFTVFDTLWQSIVVFFGAFFAYWGSTIDVASIGDLWTLAVVILVNMHLAMDVIRWNWVTHVSIWGSIVATFISVMVIDTIPTFPGYWAIFHALGTGSFWLCLLGIIITALLPRFVVKYIHQYYFPDDIQISREAEKVGTSRVVGGGDIEMHPIPVGPPR 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1119 1205 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 1171 IPR023298 -
Lele12g1119 1205 PRINTS P-type cation-transporting ATPase superfamily signature 490 504 - -
Lele12g1119 1205 PRINTS P-type cation-transporting ATPase superfamily signature 904 923 - -
Lele12g1119 1205 ProSitePatterns E1-E2 ATPases phosphorylation site. 492 498 IPR018303 -
Lele12g1119 1205 Pfam Phospholipid-translocating P-type ATPase C-terminal 932 1171 IPR032630 -
Lele12g1119 1205 Pfam Cation transport ATPase (P-type) 594 670 - -
Lele12g1119 1205 FunFam Phospholipid-transporting ATPase 180 349 - -
Lele12g1119 1205 SUPERFAMILY HAD-like 477 945 IPR036412 -
Lele12g1119 1205 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 875 989 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele12g1119 1205 Pfam Phospholipid-translocating ATPase N-terminal 108 172 IPR032631 -
Lele12g1119 1205 MobiDBLite consensus disorder prediction 24 62 - -
Lele12g1119 1205 CDD P-type_ATPase_APLT_Dnf-like 124 1064 - -
Lele12g1119 1205 SFLD Haloacid Dehalogenase 474 955 - -
Lele12g1119 1205 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 98 1182 - -
Lele12g1119 1205 Gene3D - 586 724 IPR023299 GO:0000166
Lele12g1119 1205 MobiDBLite consensus disorder prediction 24 68 - -
Lele12g1119 1205 FunFam Phospholipid-transporting ATPase 590 723 - -
Lele12g1119 1205 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 496 759 IPR023299 GO:0000166
Lele12g1119 1205 Gene3D - 742 944 IPR023214 -
Lele12g1119 1205 SFLD p-type atpase 474 955 IPR044492 -
Lele12g1119 1205 SUPERFAMILY Calcium ATPase, transduction domain A 205 346 IPR008250 -
Lele12g1119 1205 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 122 1178 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele12g1119 1205 Gene3D - 180 349 - -
Lele12g1119 1205 FunFam Phospholipid-transporting ATPase 745 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1119 Lele-ChrLele12 18419487 18424807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1119 31 1205 Primary Pumps ATPases AT5G04930 67.851 0.0 1673