Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1108 ATGGGTATCCAAACTATGGGGTCTCAAGGCGGTGGTGACGCTAATGGAAAACAGTCACAATTCCAGCCTTTGGTGCGGCAGAATTCAATGTACAGTCTCACACTTGATGAGGTTCAGAATCAATTGGGTGACTTAGGAAAGCCATTAAGCAGTATGAACCTTGATGAGCTTCTAAAAAATGTGTGGACTGCTGAGGCAAACCAGTCTATGTGTATGGACATTGAAGGCACAGCGCAAGCTAGTCAAACTGCTCTTCAGCGTCAAGCCAGTCTATCATTAACTAGTGCACTAAGCAAGAAGACAGTTGATGAGGTTTGGCGAGATATCCAACAGAACAAAAACAATGAGGAGAAGAAGTCTCGGGAGAGGCAGCCTACTTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCGGGAGTTGTTGCTGAAGCTTCTCCTGATAAAAAGAATACGGTTCCTGTGGTTGATACTGATTCAAATGTTGCAGCGACACAGTTTCCTGAACAAGGTCAGTGGATCCAGTATCCACAACCACAATATCATCACCCTCAACAAAATTTAATTGGAATTTATATGCCTGGCCATACTATGGCGCAGCCATTACATATGGGAGCTGGTTCTGCATTGGATGTTCCTTTTGCTGAAATTCCAGTTGCTCTACCTTCACCAGTGATGGGACCACTGTCAGATACGCAGACATCTGGAAGAAAAAGAGGCACACCAGAGGACATGATTGAGAAAACTGTTGAGAGGAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGAAAGAAAGCAGGCTTACACACATGAACTGGAGAATAAAGTTGCACGTTTGGAAGAGGAAAATGAGTTGTTGAGGAAACGGACGGAGCTGGAGAGCATGTTGCCATGTGCACCACCTCCTGAGCCCAAATATCAGCTCCGACGAACATCTTCAGCGCCATTTTGA 969 0.4541 MGIQTMGSQGGGDANGKQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEANQSMCMDIEGTAQASQTALQRQASLSLTSALSKKTVDEVWRDIQQNKNNEEKKSRERQPTLGEMTLEDFLVKAGVVAEASPDKKNTVPVVDTDSNVAATQFPEQGQWIQYPQPQYHHPQQNLIGIYMPGHTMAQPLHMGAGSALDVPFAEIPVALPSPVMGPLSDTQTSGRKRGTPEDMIEKTVERRQKRMIKNRESAARSRERKQAYTHELENKVARLEEENELLRKRTELESMLPCAPPPEPKYQLRRTSSAPF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1108 322 Pfam bZIP transcription factor 252 297 IPR004827 GO:0003700|GO:0006355
Lele12g1108 322 SMART brlzneu 248 304 IPR004827 GO:0003700|GO:0006355
Lele12g1108 322 Coils Coil 268 295 - -
Lele12g1108 322 Gene3D - 250 303 - -
Lele12g1108 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 297 IPR004827 GO:0003700|GO:0006355
Lele12g1108 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 25 321 IPR043452 GO:0003700|GO:0045893
Lele12g1108 322 SUPERFAMILY Leucine zipper domain 252 297 IPR046347 GO:0003700|GO:0006355
Lele12g1108 322 MobiDBLite consensus disorder prediction 297 322 - -
Lele12g1108 322 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 250 302 - -
Lele12g1108 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Lele12g1108 322 MobiDBLite consensus disorder prediction 252 276 - -
Lele12g1108 322 CDD bZIP_plant_BZIP46 252 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1108 Lele-ChrLele12 18362715 18365271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1108 17 322 bZIP Transcription Factor Family AT3G56850 55.769 6.56e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele12g1108 bZIP_1 5.8e-14 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0145 09 1006020 1008983 Lele12g1108 12 18362715 18365271 hybridization
Lele10g0149 10 984448 987002 Lele12g1108 12 18362715 18365271 hybridization